RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	TBX19	O60806	448 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	CLEC3A	O75596	197 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	IL33	O95760	270 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	F3	P13726	295 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	M6PR	P20645	277 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	PRSS3	P35030	304 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	RABIF	P47224	123 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	P2RY14	Q15391	338 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	SLC16A9	Q7RTY1	509 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	FYTTD1	Q96QD9	318 aa	Known RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	SSX3	Q99909	188 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	HDAC8	Q9BY41	377 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	ZNF442	Q9H7R0	627 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	ZMAT3	Q9HA38	289 aa	Known RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	TUBG2	Q9NRH3	451 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	LIPT1	Q9Y234	373 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	TRAV27	A0A087WT01	109 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	RGS9	O75916	674 aa	Predicted RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	HTR3B	O95264	441 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	CISD3	P0C7P0	127 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	HIST1H1T	P22492	207 aa	Predicted RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	GABRA5	P31644	462 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	RPS15A	P62244	130 aa	Known RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	DLX2	Q07687	328 aa	Predicted RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029		Q6ZS52	159 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	PRR18	Q8N4B5	295 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	SLC7A6	Q92536	515 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	SLC41A3	Q96GZ6	507 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	ST6GAL2	Q96JF0	529 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	PFDN5	Q99471	154 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	KCNS2	Q9ULS6	477 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	RHBDD3	Q9Y3P4	386 aa		11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	RIF1	Q5UIP0	2472 aa	Known RBP	11.37	□□□□□ -0.59
TMPO-212	ENST00000556029	PRAMEF26	H0Y7S4	382 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	CD34	P28906	385 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	CAPZA1	P52907	286 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	LIMK1	P53667	647 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	TRA2B	P62995	288 aa	Known RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	CHRNE	Q04844	493 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	TMEM35A	Q53FP2	167 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	TM9SF4	Q92544	642 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	GPA33	Q99795	319 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	MIXL1	Q9H2W2	232 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	METTL17	Q9H7H0	456 aa	Predicted RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	NOX1	Q9Y5S8	564 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	TMEM129	A0AVI4	362 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	SPINT1	O43278	529 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	RAB3D	O95716	219 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	HRG	P04196	525 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	TMEM225B	P0DP42	221 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	CXADR	P78310	365 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	FABP5	Q01469	135 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	METRNL	Q641Q3	311 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	TMEM205	Q6UW68	189 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	KCTD20	Q7Z5Y7	419 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	TDH	Q8IZJ6	230 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ST6GALNAC5	Q9BVH7	336 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	RCE1	Q9Y256	329 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	PRAMEF27	A3QJZ7	478 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	CDC14C	A4D256	554 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029		B4DXG7	233 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	RAB6A	P20340	208 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	SLC1A3	P43003	542 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	PDX1	P52945	283 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	RAB5B	P61020	215 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	CDK5	Q00535	292 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	TSPAN31	Q12999	210 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	GNMT	Q14749	295 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.36	□□□□□ -0.59	1e-7	■■■□□ 14.6
TMPO-212	ENST00000556029	TMEM52B	Q4KMG9	183 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ZNF550	Q7Z398	422 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	CHAC2	Q8WUX2	184 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ZNF775	Q96BV0	537 aa	Predicted RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	NECAB3	Q96P71	396 aa	Predicted RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	CNN2	Q99439	309 aa	Known RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ELF4	Q99607	663 aa	Predicted RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	PDE7B	Q9NP56	450 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	VSX1	Q9NZR4	365 aa	Predicted RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ACAD8	Q9UKU7	415 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	LRIT2	A6NDA9	550 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029		A6NLC8	198 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	SFTPD	P35247	375 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	SOX18	P35713	384 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	GPR18	Q14330	331 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	EXOSC7	Q15024	291 aa	Known RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	LTB4R	Q15722	352 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ZNF658B	Q4V348	819 aa	Predicted RBP	11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ENTPD8	Q5MY95	495 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	RNLS	Q5VYX0	342 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	ADAMTSL4	Q6UY14	1074 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	IL17RC	Q8NAC3	791 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	OR4D6	Q8NGJ1	314 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	PGAM5	Q96HS1	289 aa		11.36	□□□□□ -0.59
TMPO-212	ENST00000556029	OR7D2	Q96RA2	312 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms