RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 HIST1H2ACQ93077 130 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 IL4I1Q96RQ9 567 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 ZNF587Q96SQ5 575 aaPredicted RBP9.18□□□□□ -0.94
SRP54-208ENST00000555557 APOL4Q9BPW4 351 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 IFT27Q9BW83 186 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 POTEKPQ9BYX7 375 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 OR2B2Q9GZK3 357 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 DEFB127Q9H1M4 99 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 TSPAN10Q9H1Z9 355 aaPredicted RBP9.18□□□□□ -0.94
SRP54-208ENST00000555557 SLC6A15Q9H2J7 730 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 FKRPQ9H9S5 495 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 ZNF226Q9NYT6 803 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 LUZP4Q9P127 313 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 TNFRSF10DQ9UBN6 386 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 ZNF229Q9UJW7 825 aa9.18□□□□□ -0.94
SRP54-208ENST00000555557 MRPS18CQ9Y3D5 142 aaKnown RBP9.18□□□□□ -0.94
SRP54-208ENST00000555557 SPIN1Q9Y657 262 aaPredicted RBP9.18□□□□□ -0.94
SRP54-208ENST00000555557 LIPT2A6NK58 231 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 C11orf98E9PRG8 122 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 BHLHE40O14503 412 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 SEC14L5O43304 696 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 OR2T1O43869 369 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 PRKYO43930 277 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 SERPINI2O75830 405 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 AKR7A3O95154 331 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 NDUFB2O95178 105 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 PPP1R3DO95685 299 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 MT-ATP6P00846 226 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 ZNF17P17021 662 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 KLK2P20151 261 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 AHCYP23526 432 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 IDUAP35475 653 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 RPL4P36578 427 aaKnown RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 MAP2K6P52564 334 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 SMSP52788 366 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 GFRA1P56159 465 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 NUP107P57740 925 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 CDC42P60953 191 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 RPS4XP62701 263 aaKnown RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 RAC1P63000 192 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 MYBPC1Q00872 1141 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 RPL18Q07020 188 aaKnown RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 CDK5R2Q13319 367 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 IL18R1Q13478 541 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 ZNF169Q14929 603 aaPredicted RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 SMN1Q16637 294 aaKnown RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 HYAL4Q2M3T9 481 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 C12orf73Q69YU5 71 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 CASP12Q6UXS9 341 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 PTCHD4Q6ZW05 846 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 MAMDC2Q7Z304 686 aaPredicted RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 NANOGNBQ7Z5D8 188 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 BCDIN3DQ7Z5W3 292 aaKnown RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 SLC22A16Q86VW1 577 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 CCDC103Q8IW40 242 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 TCEANCQ8N8B7 351 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 OR2T33Q8NG76 320 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 OR52L1Q8NGH7 329 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 OR5J2Q8NH18 312 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 MFSD8Q8NHS3 518 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 ZNF71Q9NQZ8 489 aaPredicted RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 IMPAD1Q9NX62 359 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 TAS2R5Q9NYW4 299 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 TP53TG5Q9Y2B4 290 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 HIF3AQ9Y2N7 669 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 GPR52Q9Y2T5 361 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 ADAM18Q9Y3Q7 739 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 LIPGQ9Y5X9 500 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 A0A0J9YW62 118 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 HTR3EA5X5Y0 456 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 TNFSF11O14788 317 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 TLX2O43763 284 aaPredicted RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 FAM87AP0C7U9 286 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 ADORA3P0DMS8 318 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 FMO3P31513 532 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 UQCRC1P31930 480 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 DIO1P49895 249 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 SUCLG1P53597 346 aaKnown RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 OR2B6P58173 313 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 PRPS1P60891 318 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 ERVK-25P63136 954 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 PMS2P3Q13401 168 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 SLC10A1Q14973 349 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 MAD2L1BPQ15013 274 aaPredicted RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 SNAPC1Q16533 368 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 PGGHGQ32M88 737 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 ALG10Q5BKT4 473 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 RPL13AP3Q6NVV1 102 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 TMEM154Q6P9G4 183 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 C5orf46Q6UWT4 87 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 Q6ZS92 163 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 TMPPEQ6ZT21 453 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 ZNF786Q8N393 782 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 SETD9Q8NE22 299 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 RHOXF1Q8NHV9 184 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 SLC25A43Q8WUT9 341 aaPredicted RBP9.17□□□□□ -0.94
SRP54-208ENST00000555557 APH1BQ8WW43 257 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 TAPBPLQ9BX59 468 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 SLC25A19Q9HC21 320 aa9.17□□□□□ -0.94
SRP54-208ENST00000555557 IER3IP1Q9Y5U9 82 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms