RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 BRD3OSQ6XYD6 125 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 ATP6V0D2Q8N8Y2 350 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 C15orf56Q8N910 161 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 LINC00304Q8N9R0 145 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 MSANTD4Q8NCY6 345 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 CATSPER1Q8NEC5 780 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 OR4K14Q8NGD5 310 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 ZNF461Q8TAF7 563 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 SYNPRQ8TBG9 265 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 HTR3CQ8WXA8 447 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 SEC22AQ96IW7 307 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 OR10C1Q96KK4 312 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 NOX3Q9HBY0 568 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 SLC40A1Q9NP59 571 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 SIGLEC8Q9NYZ4 499 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 ZNF222Q9UK12 451 aa1.54□□□□□ -2.16
SNX6-204ENST00000555541 A0A1W2PNV4 684 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 CBR3O75828 277 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 HPGDP15428 266 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 PSMC3P17980 439 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 OMGP23515 440 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 CMA1P23946 247 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 HPCAL1P37235 193 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 CYTH1Q15438 398 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 FRMPD3Q5JV73 1810 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 FBXW9Q5XUX1 488 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 RAET1GQ6H3X3 334 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 CATSPER4Q7RTX7 472 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 SLC26A11Q86WA9 606 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 CD300LFQ8TDQ1 290 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.53□□□□□ -2.16
SNX6-204ENST00000555541 NXF5Q9H1B4 397 aaKnown RBP1.53□□□□□ -2.16
SNX6-204ENST00000555541 WDR76Q9H967 626 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 ZFP14Q9HCL3 533 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 RASD1Q9Y272 281 aa1.53□□□□□ -2.16
SNX6-204ENST00000555541 NCAPD2Q15021 1401 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 HIP1O00291 1037 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 TRIM16O95361 564 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 KLK3P07288 261 aaPredicted RBP1.52□□□□□ -2.17
SNX6-204ENST00000555541 COX5AP20674 150 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 STARD6P59095 220 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 MXD4Q14582 209 aaPredicted RBP1.52□□□□□ -2.17
SNX6-204ENST00000555541 SGCAQ16586 387 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 GUCA2BQ16661 112 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 FAM71F2Q6NXP2 309 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 Q6ZN92 141 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 KIAA1328Q86T90 577 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 OR4D9Q8NGE8 314 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 OR5W2Q8NH69 310 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 RAET1EQ8TD07 263 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 ACTRT1Q8TDG2 376 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 ESR2Q92731 530 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 MRPL38Q96DV4 380 aaKnown RBP1.52□□□□□ -2.17
SNX6-204ENST00000555541 ITCHQ96J02 903 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 OR2A5Q96R48 311 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 NIPSNAP3BQ9BS92 247 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 FICDQ9BVA6 458 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 ZNF416Q9BWM5 594 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 MRPL13Q9BYD1 178 aaKnown RBP1.52□□□□□ -2.17
SNX6-204ENST00000555541 TM9SF3Q9HD45 589 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 NOL7Q9UMY1 257 aaKnown RBP1.52□□□□□ -2.17
SNX6-204ENST00000555541 AK6Q9Y3D8 172 aaKnown RBP1.52□□□□□ -2.17
SNX6-204ENST00000555541 SHROOM3Q8TF72 1996 aa1.52□□□□□ -2.17
SNX6-204ENST00000555541 DOCK8Q8NF50 2099 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 IGKV3D-11A0A0A0MRZ8 115 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 NSG1A0A0A6YYJ2 146 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 GSAPA4D1B5 854 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 RBMY1BA6NDE4 496 aaKnown RBP1.51□□□□□ -2.17
SNX6-204ENST00000555541 RBMY1EA6NEQ0 496 aaKnown RBP1.51□□□□□ -2.17
SNX6-204ENST00000555541 C12orf71A8MTZ7 269 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 LANCL1O43813 399 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 MPZL1O95297 269 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 RBMY1DP0C7P1 496 aaKnown RBP1.51□□□□□ -2.17
SNX6-204ENST00000555541 RBMY1A1P0DJD3 496 aaKnown RBP1.51□□□□□ -2.17
SNX6-204ENST00000555541 ABOP16442 354 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 DNAJB1P25685 340 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 PLA2G16P53816 162 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 CEBPEQ15744 281 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 SAMD4BQ5PRF9 694 aaKnown RBP1.51□□□□□ -2.17
SNX6-204ENST00000555541 MARCH8Q5T0T0 291 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 OR2G6Q5TZ20 316 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 NLRP9Q7RTR0 991 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 OR2G3Q8NGZ4 309 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 LRRC58Q96CX6 371 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 CMTM7Q96FZ5 175 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 RIOK2Q9BVS4 552 aaKnown RBP1.51□□□□□ -2.17
SNX6-204ENST00000555541 RPP21Q9H633 154 aaKnown RBP1.51□□□□□ -2.17
SNX6-204ENST00000555541 RNF167Q9H6Y7 350 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 NGBQ9NPG2 151 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 IL26Q9NPH9 171 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 GLRX2Q9NS18 164 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 GNG12Q9UBI6 72 aa1.51□□□□□ -2.17
SNX6-204ENST00000555541 MN1Q10571 1320 aaPredicted RBP1.5□□□□□ -2.17
SNX6-204ENST00000555541 IGHV3-66A0A0C4DH42 116 aa1.5□□□□□ -2.17
SNX6-204ENST00000555541 A0A1W2PP18 115 aa1.5□□□□□ -2.17
SNX6-204ENST00000555541 C12orf77C9JDV5 145 aa1.5□□□□□ -2.17
SNX6-204ENST00000555541 NPIPA7E9PJI5 369 aa1.5□□□□□ -2.17
SNX6-204ENST00000555541 RASGRF2O14827 1237 aa1.5□□□□□ -2.17
SNX6-204ENST00000555541 RRP8O43159 456 aaKnown RBP1.5□□□□□ -2.17
SNX6-204ENST00000555541 UGT1A9O60656 530 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms