RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 KRTAP10-9P60411 292 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 ITGADQ13349 1161 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 C1DQ13901 141 aaKnown RBP10.72□□□□□ -0.69
SRP54-206ENST00000555317 SLC17A1Q14916 467 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 POU4F3Q15319 338 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 SFRP5Q5T4F7 317 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 FBXW9Q5XUX1 488 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 TTC33Q6PID6 262 aaPredicted RBP10.72□□□□□ -0.69
SRP54-206ENST00000555317 AAED1Q7RTV5 226 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 PIGWQ7Z7B1 504 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 WFDC8Q8IUA0 241 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 P3H2Q8IVL5 708 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 ANKS4BQ8N8V4 417 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 ADAMTS16Q8TE57 1224 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 FAM162AQ96A26 154 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 S100PBPQ96BU1 408 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 PIK3IP1Q96FE7 263 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 WFDC6Q9BQY6 131 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 TMEM43Q9BTV4 400 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 NGBQ9NPG2 151 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 ASB6Q9NWX5 421 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 NDE1Q9NXR1 346 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 TAGLN3Q9UI15 199 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 PRSS50Q9UI38 385 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 SLC7A7Q9UM01 511 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 CORINQ9Y5Q5 1042 aa10.72□□□□□ -0.69
SRP54-206ENST00000555317 CIB4A0PJX0 185 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 M0R082 166 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 AKAP8O43823 692 aaKnown RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 TPST2O60704 377 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 LYZL6O75951 148 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 FAM107AO95990 144 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 IGHV3-9P01782 118 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 ZNF43P17038 809 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 PTNP21246 168 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 CBLP22681 906 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 CRYGSP22914 178 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 GRPRP30550 384 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 DNAJA1P31689 397 aaKnown RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 GSK3BP49841 420 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 EGR4Q05215 589 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 NPTX1Q15818 432 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 STK11Q15831 433 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 H1FNTQ75WM6 255 aaPredicted RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 ABHD12BQ7Z5M8 362 aaPredicted RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 LSRQ86X29 649 aaPredicted RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 CDC20BQ86Y33 519 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 RBM45Q8IUH3 476 aaKnown RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 CCDC197Q8NCU1 140 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 ZNF417Q8TAU3 575 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 HSD17B8Q92506 261 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 TAAR8Q969N4 342 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 TMEM45BQ96B21 275 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 MUCL1Q96DR8 90 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 MPP4Q96JB8 637 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 ZNF587Q96SQ5 575 aaPredicted RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 PTDSS2Q9BVG9 487 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 POLR2J2Q9GZM3 115 aaKnown RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 POLR2J3Q9H1A7 115 aaKnown RBP10.71□□□□□ -0.69
SRP54-206ENST00000555317 B3GALT5Q9Y2C3 310 aa10.71□□□□□ -0.69
SRP54-206ENST00000555317 PRR14LQ5THK1 2151 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 OTOGQ6ZRI0 2925 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 IGKV1D-42A0A075B6H8 117 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 OR6C65A6NJZ3 312 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 FTCDNL1E5RQL4 147 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 KPNA4O00629 521 aaPredicted RBP10.7□□□□□ -0.7
SRP54-206ENST00000555317 OR6A2O95222 327 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 MT-ATP6P00846 226 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 HRGP04196 525 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 HIST1H2ABP04908 130 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 IFNW1P05000 195 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 GGT1P19440 569 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 TNFRSF1BP20333 461 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 HOXC12P31275 282 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 OR1E2P47887 323 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 CRYBA2P53672 197 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 NR1H2P55055 460 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 SELENOWP63302 87 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 TGFBR3Q03167 851 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 FAPQ12884 760 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 PMS2P3Q13401 168 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 TSC22D1Q15714 1073 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 BEX5Q5H9J7 111 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 C8orf82Q6P1X6 216 aaPredicted RBP10.7□□□□□ -0.7
SRP54-206ENST00000555317 C16orf89Q6UX73 402 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 FKBP9P1Q75LS8 142 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 HIST3H2AQ7L7L0 130 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 SSX8Q7RTT4 187 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 SCAIQ8N9R8 606 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 POMGNT2Q8NAT1 580 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 OR4D11Q8NGI4 311 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 OR6S1Q8NH40 331 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 GEMIN6Q8WXD5 167 aaKnown RBP10.7□□□□□ -0.7
SRP54-206ENST00000555317 HIST1H2ACQ93077 130 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 SLC41A3Q96GZ6 507 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 PCDHAC1Q9H158 963 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 SLCO5A1Q9H2Y9 848 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 TAS2R16Q9NYV7 291 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 ABCD2Q9UBJ2 740 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 MALT1Q9UDY8 824 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms