RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SCN1BQ07699 218 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 FLYWCH1Q4VC44 716 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 FCRLBQ6BAA4 426 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 C22orf42Q6IC83 251 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 METAP1DQ6UB28 335 aaPredicted RBP15.82■□□□□ 0.12
SHOX-204ENST00000554971 GPR151Q8TDV0 419 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 TMEM255BQ8WV15 326 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 SLC35B4Q969S0 331 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 SRRQ9GZT4 340 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 PLEKHB1Q9UF11 243 aaPredicted RBP15.82■□□□□ 0.12
SHOX-204ENST00000554971 CARD8Q9Y2G2 431 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 CDHR4A6H8M9 788 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 K7EM74 188 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 DYRK3O43781 588 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 FAM87AP0C7U9 286 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 GLYR1Q49A26 553 aaPredicted RBP15.82■□□□□ 0.12
SHOX-204ENST00000554971 CLEC12AQ5QGZ9 265 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 OR2G6Q5TZ20 316 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 SLC30A6Q6NXT4 461 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 ZNF613Q6PF04 617 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 C16orf47Q6ZP98 133 aaPredicted RBP15.82■□□□□ 0.12
SHOX-204ENST00000554971 TMPRSS11FQ6ZWK6 438 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 OR8H2Q8N162 312 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 COX18Q8N8Q8 333 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 THAP3Q8WTV1 239 aaPredicted RBP15.82■□□□□ 0.12
SHOX-204ENST00000554971 PRSS27Q9BQR3 290 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 ZNF559Q9BR84 538 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 OR10A5Q9H207 317 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 UBQLN3Q9H347 655 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 MOV10Q9HCE1 1003 aaKnown RBP15.82■□□□□ 0.12
SHOX-204ENST00000554971 CBLCQ9ULV8 474 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 BAIAP2Q9UQB8 552 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 GPR52Q9Y2T5 361 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 CAB39Q9Y376 341 aaPredicted RBP15.82■□□□□ 0.12
SHOX-204ENST00000554971 COQ9O75208 318 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 PDGFAP04085 211 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 BMP7P18075 431 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 EMDP50402 254 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 PPP3R1P63098 170 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 RNF4P78317 190 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 SELENBP1Q13228 472 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 LNX2Q8N448 690 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 IL17RDQ8NFM7 739 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 C16orf52Q8NHV5 167 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 TMEM239Q8WW34 195 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 ERVK13-1Q9NX77 482 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 TNFRSF10DQ9UBN6 386 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 COPS7AQ9UBW8 275 aa15.81■□□□□ 0.12
SHOX-204ENST00000554971 J3QRE1 110 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ZNF354AO60765 605 aaPredicted RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 SDC2P34741 201 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 GPR4P46093 362 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 CTBP2P56545 445 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 RPS25P62851 125 aaKnown RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 POU6F2P78424 691 aaPredicted RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 HNRNPA0Q13151 305 aaKnown RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 EBPQ15125 230 aaKnown RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 OR1Q1Q15612 314 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 GPR68Q15743 365 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 AGAP6Q5VW22 663 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 GRAMD2AQ8IUY3 354 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ARMC10Q8N2F6 343 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 OR52R1Q8NGF1 315 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ABHD17AQ96GS6 310 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ART5Q96L15 291 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 AGAP4Q96P64 663 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ZNF649Q9BS31 505 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 KATNB1Q9BVA0 655 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 A0A1W2PQL4 384 aaPredicted RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 NKX2-2O95096 273 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 DRD5P21918 477 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ATP6V1E1P36543 226 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 HOXC5Q00444 222 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ASAH1Q13510 395 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ZNF544Q6NX49 715 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 JMJD6Q6NYC1 403 aaPredicted RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 CXXC5Q7LFL8 322 aaKnown RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 LAX1Q8IWV1 398 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 ARIH2OSQ8N7S6 290 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 SAMD8Q96LT4 415 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 DEFB126Q9BYW3 111 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 TPK1Q9H3S4 243 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 TMEM27Q9HBJ8 222 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 TBC1D24Q9ULP9 559 aa15.8■□□□□ 0.12
SHOX-204ENST00000554971 PCDHGA9Q9Y5G4 932 aaKnown RBP15.8■□□□□ 0.12
SHOX-204ENST00000554971 FABP12A6NFH5 140 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 ATP6V1G1O75348 118 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 LYPD3O95274 346 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 SPNP16150 400 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 PAICSP22234 425 aaKnown RBP15.79■□□□□ 0.12
SHOX-204ENST00000554971 RBM34P42696 430 aaKnown RBP15.79■□□□□ 0.12
SHOX-204ENST00000554971 TPTEP56180 551 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 TRAM1Q15629 374 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 ZNF79Q15937 498 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 MRPL2Q5T653 305 aaKnown RBP15.79■□□□□ 0.12
SHOX-204ENST00000554971 MEPCEQ7L2J0 689 aaKnown RBP15.79■□□□□ 0.12
SHOX-204ENST00000554971 ACBD7Q8N6N7 88 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 ZNF441Q8N8Z8 693 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 EXD3Q8N9H8 876 aa15.79■□□□□ 0.12
SHOX-204ENST00000554971 OR7G1Q8NGA0 311 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms