RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 MS4A15Q8N5U1 240 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 FAM160A2Q8N612 972 aaPredicted RBP10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ZNF680Q8NEM1 530 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 OR13H1Q8NG92 308 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 SLC37A2Q8TED4 501 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ZNRF4Q8WWF5 429 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 OR2A5Q96R48 311 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 C19orf53Q9UNZ5 99 aaPredicted RBP10.9□□□□□ -0.66
XRCC3-208ENST00000554811 SLC22A7Q9Y694 548 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 TBX19O60806 448 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 SERPINA3P01011 423 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 ERGP11308 486 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 EPXP11678 715 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 SLC6A1P30531 599 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 CCKBRP32239 447 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 ARHGDIBP52566 201 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 TAS2R43P59537 309 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 EEF1A1P68104 462 aaKnown RBP10.89□□□□□ -0.67
XRCC3-208ENST00000554811 HHEXQ03014 270 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 C9orf50Q5SZB4 431 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 PRAMEF17Q5VTA0 474 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 TCTE3Q8IZS6 198 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 RCBTB1Q8NDN9 531 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 FCAMRQ8WWV6 532 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
XRCC3-208ENST00000554811 TGM7Q96PF1 710 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 SLX1AQ9BQ83 275 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 C20orf85Q9H1P6 137 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 PRTFDC1Q9NRG1 225 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 RXFP3Q9NSD7 469 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 MED17Q9NVC6 651 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 ABCA7Q8IZY2 2146 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 C2orf72A6NCS6 295 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 C2orf74A8MZ97 194 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 ZNF593O00488 134 aaPredicted RBP10.89□□□□□ -0.67
XRCC3-208ENST00000554811 SPARCP09486 303 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 TMIGD3P0DMS9 266 aaPredicted RBP10.89□□□□□ -0.67
XRCC3-208ENST00000554811 OR1D4P47884 311 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 PTH2RP49190 550 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 SELENOPP49908 381 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 NRG3P56975 720 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 HTRA4P83105 476 aaPredicted RBP10.89□□□□□ -0.67
XRCC3-208ENST00000554811 GFOD2Q3B7J2 385 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 PCGF3Q3KNV8 242 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 BEX5Q5H9J7 111 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 TOR2AQ5JU69 321 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 TTYH1Q9H313 450 aaPredicted RBP10.89□□□□□ -0.67
XRCC3-208ENST00000554811 NIPAL2Q9H841 368 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 SFXN1Q9H9B4 322 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 NCDNQ9UBB6 729 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 TRAV18A0A075B6X5 111 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 KRT33AO76009 404 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 IGHA1P01876 353 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 KIAA1024LP59773 190 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 GRM7Q14831 915 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 ZNF425Q6IV72 752 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 ZNF767PQ75MW2 155 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 OR2L13Q8N349 312 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 LSM14AQ8ND56 463 aaKnown RBP10.89□□□□□ -0.67
XRCC3-208ENST00000554811 C10orf90Q96M02 699 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 B3GNT4Q9C0J1 378 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 PITHD1Q9GZP4 211 aaPredicted RBP10.89□□□□□ -0.67
XRCC3-208ENST00000554811 MCOLN1Q9GZU1 580 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 ARL6Q9H0F7 186 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 NARFLQ9H6Q4 476 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 SATB2Q9UPW6 733 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 SLC17A4Q9Y2C5 497 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 ZDBF2Q9HCK1 2354 aa10.89□□□□□ -0.67
XRCC3-208ENST00000554811 OR6C68A6NDL8 312 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 LINC00271P0C7V0 271 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 TRAPPC2P0DI81 140 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 TRAPPC2BP0DI82 140 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 SRMP19623 302 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 HSF2Q03933 536 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 GRK1Q15835 563 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 WDR45BQ5MNZ6 344 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 SLC38A6Q8IZM9 456 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 YIPF5Q969M3 257 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 ALG12Q9BV10 488 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 SYT4Q9H2B2 425 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 RANBP3Q9H6Z4 567 aaPredicted RBP10.88□□□□□ -0.67
XRCC3-208ENST00000554811 NOX3Q9HBY0 568 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 CENPMQ9NSP4 180 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 GRHPRQ9UBQ7 328 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 MRPS33Q9Y291 106 aaKnown RBP10.88□□□□□ -0.67
XRCC3-208ENST00000554811 EXOGQ9Y2C4 368 aaKnown RBP10.88□□□□□ -0.67
XRCC3-208ENST00000554811 NUBP2Q9Y5Y2 271 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 A0A1B0GVI7 797 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 DCDC2BA2VCK2 349 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 CLDN4O14493 209 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 SLC22A5O76082 557 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 GTF2F2P13984 249 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 CFL1P23528 166 aaKnown RBP10.88□□□□□ -0.67
XRCC3-208ENST00000554811 ACTC1P68032 377 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 ACTA1P68133 377 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 GUCA2AQ02747 115 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 EXOSC2Q13868 293 aaKnown RBP10.88□□□□□ -0.67
XRCC3-208ENST00000554811 NKPD1Q17RQ9 610 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 LAMTOR1Q6IAA8 161 aa10.88□□□□□ -0.67
XRCC3-208ENST00000554811 LRRN1Q6UXK5 716 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms