RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZNF414Q96IQ9 312 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 SEC22AQ96IW7 307 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 PLEKHA8Q96JA3 519 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 TECTBQ96PL2 329 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 ARHGDIGQ99819 225 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 EBF4Q9BQW3 602 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 SLC39A3Q9BRY0 314 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 YTHDF1Q9BYJ9 559 aaKnown RBP2.21□□□□□ -2.06
SCFD1-213ENST00000554776 GPR61Q9BZJ8 451 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 POLR2J2Q9GZM3 115 aaKnown RBP2.21□□□□□ -2.06
SCFD1-213ENST00000554776 POLR2J3Q9H1A7 115 aaKnown RBP2.21□□□□□ -2.06
SCFD1-213ENST00000554776 OR51J1Q9H342 316 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 ZFP14Q9HCL3 533 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 MARCH5Q9NX47 278 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 B4GALT7Q9UBV7 327 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 MMP17Q9ULZ9 603 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 TMCO1Q9UM00 188 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 NPTNQ9Y639 398 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 RLFQ13129 1914 aa2.21□□□□□ -2.06
SCFD1-213ENST00000554776 IGLV3-22A0A075B6J6 115 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 IGHV1OR21-1A0A087WYE8 117 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 A0A1W2PPV9 198 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 FAM231BA6NCW3 169 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 OR5B21A6NL26 309 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 CCDC169A6NNP5 214 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF716A6NP11 495 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ABCD4O14678 606 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF780AO75290 641 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-213ENST00000554776 CIB2O75838 187 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 SUPT7LO94864 414 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 LY6G6DO95868 133 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF735P0CB33 412 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 SLC2A3P11169 496 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 RPS2P15880 293 aaKnown RBP2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF19P17023 458 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 OPRD1P41143 372 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 MRPL28Q13084 256 aaKnown RBP2.2□□□□□ -2.06
SCFD1-213ENST00000554776 PDIA2Q13087 525 aaKnown RBP2.2□□□□□ -2.06
SCFD1-213ENST00000554776 PPIL2Q13356 520 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF630Q2M218 657 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-213ENST00000554776 OLFML2AQ68BL7 652 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 C1orf94Q6P1W5 598 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 RUFY3Q7L099 469 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ASCL5Q7RTU5 278 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 H2BFWTQ7Z2G1 175 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 TGIF2LXQ8IUE1 241 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 C14orf178Q8N769 122 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-213ENST00000554776 BBS1Q8NFJ9 593 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 OR2AP1Q8NGE2 309 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 OR9A1PQ8NGU1 263 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 OR9G1Q8NH87 305 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 FANK1Q8TC84 345 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 FAM151AQ8WW52 585 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ARPC1AQ92747 370 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 NUS1Q96E22 293 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 TPD52L3Q96J77 140 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 MAGEB18Q96M61 343 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 MS4A4EQ96PG1 132 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 CNN2Q99439 309 aaKnown RBP2.2□□□□□ -2.06
SCFD1-213ENST00000554776 ANKRD19PQ9H560 264 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 NARFLQ9H6Q4 476 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 TM9SF3Q9HD45 589 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 AIG1Q9NVV5 245 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 KLHL28Q9NXS3 571 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 CTNNA3Q9UI47 895 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 TNRQ92752 1358 aa2.2□□□□□ -2.06
SCFD1-213ENST00000554776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.2□□□□□ -2.06
SCFD1-213ENST00000554776 SH3TC1Q8TE82 1336 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 IGHV3OR16-13A0A075B7E8 117 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 A0A1W2PPE3 182 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CTAGE15A4D2H0 777 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 LOC110117498-PIK3R3F6TDL0 507 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 UPK3AO75631 287 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 TNFSF13O75888 250 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 MMP23AO75900 390 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 SNAPINO95295 136 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CST1P01037 141 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CT62P0C5K7 136 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 ABOP16442 354 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 SLC2A5P22732 501 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 COX7A1P24310 79 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CD1BP29016 333 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 RFC4P35249 363 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 VDAC2P45880 294 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-213ENST00000554776 GYG1P46976 350 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CRYBB1P53674 252 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-213ENST00000554776 ATP5IP56385 69 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-213ENST00000554776 PRPS1P60891 318 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 SCRN3Q0VDG4 424 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CUL2Q13617 745 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 MICBQ29980 383 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 PARP15Q460N3 678 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 FHL5Q5TD97 284 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 PRAMEF20Q5VT98 475 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 C1orf146Q5VVC0 180 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 RNASEKQ6P5S7 137 aaKnown RBP2.19□□□□□ -2.06
SCFD1-213ENST00000554776 TMIGD1Q6UXZ0 262 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 SCARA5Q6ZMJ2 495 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CTAGE6Q86UF2 777 aa2.19□□□□□ -2.06
SCFD1-213ENST00000554776 CDR2LQ86X02 465 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms