RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PTPMT1Q8WUK0 201 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 C17orf50Q8WW18 174 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ASB17Q8WXJ9 295 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 HPS1Q92902 700 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM54Q969K7 222 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 C16orf58Q96GQ5 468 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SLC38A2Q96QD8 506 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 OR2M4Q96R27 311 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 DMRTA2Q96SC8 542 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 KCNK17Q96T54 332 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TSNAXQ99598 290 aaKnown RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 APOL5Q9BWW9 433 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 C1QTNF7Q9BXJ2 289 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PARD6GQ9BYG4 376 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 C6orf106Q9H6K1 298 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 RHBDL2Q9NX52 303 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 NCKAP1Q9Y2A7 1128 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CPED1A4D0V7 1026 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ANKDD1BA6NHY2 528 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF879B4DU55 563 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CDRT1O95170 752 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 DIRAS3O95661 229 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 WDPCPO95876 746 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TCRBP04435 133 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SPI1P17947 270 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 NTSP30990 170 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PPICP45877 212 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ERFP50548 548 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 GPR85P60893 370 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 H3F3AP84243 136 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 GK2Q14410 553 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 LAPTM4AQ15012 233 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SMAD1Q15797 465 aaKnown RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 AARDQ4LEZ3 155 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SPANXN2Q5MJ10 180 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 VAX1Q5SQQ9 334 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PDZK1Q5T2W1 519 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM42Q69YG0 159 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF660Q6AZW8 331 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM205Q6UW68 189 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 DRAM2Q6UX65 266 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF550Q7Z398 422 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CFAP206Q8IYR0 622 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 GPR135Q8IZ08 494 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 D2HGDHQ8N465 521 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF454Q8N9F8 522 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 OR5J2Q8NH18 312 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CLDN23Q96B33 292 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SPRY4Q9C004 299 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 HRASLSQ9HDD0 168 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 MMP25Q9NPA2 562 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TRIM36Q9NQ86 728 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 MIEF1Q9NQG6 463 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 KIF17Q9P2E2 1029 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 OR5V1Q9UGF6 321 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 KCNN3Q9UGI6 736 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ATPIF1Q9UII2 106 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 HEATR5AQ86XA9 2040 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TDRD6O60522 2096 aaKnown RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TRBV6-6A0A0A6YYG2 114 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SPTY2D1-AS1A0A0U1RR47 76 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 RFPL4AA6NLU0 287 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 RFPL4AL1F8VTS6 287 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SOCS6O14544 535 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ORC5O43913 435 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 FCMRO60667 390 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PPP1R3DO95685 299 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CYP4B1P13584 511 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PPP3CBP16298 524 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 DRD1P21728 446 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PSMB5P28074 263 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 RCVRNP35243 200 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 LTBRP36941 435 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SLC6A8P48029 635 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 HTRA3P83110 453 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 HYAL1Q12794 435 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 FOXF1Q12946 379 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SYTL3Q4VX76 610 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 MESTQ5EB52 335 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 WDR74Q6RFH5 385 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 RTL4Q6ZR62 310 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ABHD13Q7L211 337 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 NLRC3Q7RTR2 1065 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 RANBP3LQ86VV4 465 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 BPHLQ86WA6 291 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 IFNEQ86WN2 208 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ANGPTL5Q86XS5 388 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 P3H2Q8IVL5 708 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 MISPQ8IVT2 679 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 LILRB2Q8N423 598 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 RFLNBQ8N5W9 214 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 OR8G5Q8NG78 346 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 OR4K14Q8NGD5 310 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 OR6C4Q8NGE1 309 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 XAGE5Q8WWM1 108 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 DNASE2BQ8WZ79 361 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 OR1E3Q8WZA6 343 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 MRPL38Q96DV4 380 aaKnown RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SECISBP2Q96T21 854 aaKnown RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 OCSTAMPQ9BR26 566 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms