RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 DCTN2Q13561 401 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 CUL3Q13618 768 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 DDX39BQ13838 428 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 GANABQ14697 944 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 P2RY6Q15077 328 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 SRSF7Q16629 238 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 KCTD19Q17RG1 926 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 FBXO48Q5FWF7 155 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 MFSD12Q6NUT3 480 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 IL17RELQ6ZVW7 336 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 MOB3CQ70IA8 216 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 LRRC70Q7Z2Q7 622 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 NUDT13Q86X67 352 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 DDIASQ8IXT1 998 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 GABRG1Q8N1C3 465 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 FBXL14Q8N1E6 418 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF525Q8N782 197 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 FADS6Q8N9I5 356 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 OR2M3Q8NG83 312 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 OR52B6Q8NGF0 335 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 OR5M1Q8NGP8 315 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 RNF138Q8WVD3 245 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 MSI2Q96DH6 328 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 MUCL1Q96DR8 90 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PKNOX2Q96KN3 472 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 KLHL15Q96M94 604 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 SIGLEC11Q96RL6 698 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 HBEGFQ99075 208 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 DHRS9Q9BPW9 319 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 CACNG6Q9BXT2 260 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF717Q9BY31 904 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 ITPAQ9BY32 194 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 BRF2Q9HAW0 419 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 FOLH1BQ9HBA9 442 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 POPDC3Q9HBV1 291 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 SPAG4Q9NPE6 437 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PAPOLBQ9NRJ5 636 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 CD274Q9NZQ7 290 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 MED11Q9P086 117 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF639Q9UID6 485 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PSME2Q9UL46 239 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 MCTS1Q9ULC4 181 aaKnown RBP4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PLLPQ9Y342 182 aa4.26□□□□□ -1.73
ATXN3-228ENST00000554592 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.26□□□□□ -1.734e-12■■■□□ 18.3
ATXN3-228ENST00000554592 ARHGAP21Q5T5U3 1957 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 TRBV5-3A0A0A0MS03 114 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 TMEM89A2RUT3 159 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 GOLGA6L10A6NI86 522 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 B4DXG7 233 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 FAM157AC9JC47 383 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 E7EQL1 145 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 H0YIV9 168 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 H7C417 338 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 K7EPI3 171 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 FOXE1O00358 373 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ADAMDEC1O15204 470 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 SLU7O95391 586 aaKnown RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 IL1AP01583 271 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 GBAP04062 536 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ATP1B1P05026 303 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 LCKP06239 509 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 CT45A8P0DMV1 189 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 CT45A9P0DMV2 189 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 IL12BP29460 328 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 EMDP50402 254 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 PDLIM4P50479 330 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 FABP6P51161 128 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ATP6V0D1P61421 351 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 CHRNB3Q05901 458 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ITGADQ13349 1161 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 KLF9Q13886 244 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 GGTLC2Q14390 218 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 EXOSC7Q15024 291 aaKnown RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 TSC22D1Q15714 1073 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 TRMT12Q53H54 448 aaKnown RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ENTPD8Q5MY95 495 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 PDSS1Q5T2R2 415 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 LIPJQ5W064 366 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 C11orf71Q6IPW1 123 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 SLC18B1Q6NT16 456 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 Q6ZSR9 355 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 CPLX4Q7Z7G2 160 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 P2RY8Q86VZ1 359 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ZC3HC1Q86WB0 502 aaKnown RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF619Q8N2I2 560 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 MUC15Q8N387 334 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 RNF175Q8N4F7 328 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 SPATA6LQ8N4H0 392 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 BANPQ8N9N5 519 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF540Q8NDQ6 660 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 OR52R1Q8NGF1 315 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 OR10D3Q8NH80 312 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 TRPC4APQ8TEL6 797 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 DUSP19Q8WTR2 217 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 MAGOHBQ96A72 148 aaKnown RBP4.25□□□□□ -1.73
ATXN3-228ENST00000554592 EME1Q96AY2 570 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 KLHL29Q96CT2 875 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 ERP27Q96DN0 273 aa4.25□□□□□ -1.73
ATXN3-228ENST00000554592 C16orf45Q96MC5 204 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms