RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SPTA1P02549 2419 aa5.44□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3DA0A087WVF3 549 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3IA0A087WXS9 549 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3EA0A087X179 549 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3KA0A087X1G2 549 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3FA6NER0 549 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 DUXAA6NLW8 204 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3LB9A6J9 549 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 PRAMEF26H0Y7S4 382 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 J3KTA2 159 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 K7ERQ8 282 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF749O43361 778 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TSPAN6O43657 245 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SSX4O60224 188 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SDC3O75056 442 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SLC22A5O76082 557 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 OR5F1O95221 314 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ETHE1O95571 254 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ECDO95905 644 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 KLK1P06870 262 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 FHP07954 510 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 IL3P08700 152 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 IFI6P09912 130 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ELFN1P0C7U0 828 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3HP0C7X1 549 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 LIMS3P0CW19 117 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 LIMS4P0CW20 117 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 NR2F1P10589 423 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ERGP11308 486 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SFTPCP11686 197 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TYRP1P17643 537 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 NPR2P20594 1047 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 PRKAR1BP31321 381 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 CD70P32970 193 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ETV5P41161 510 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 CCT3P49368 545 aaKnown RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ETV1P50549 477 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 CCR8P51685 355 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SRP54P61011 504 aaKnown RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 MRPS10P82664 201 aaKnown RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 DPTQ07507 201 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 RGS1Q08116 209 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TGM3Q08188 693 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 MGAT2Q10469 447 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TMEM115Q12893 351 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 DYRK1AQ13627 763 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 KRT33BQ14525 404 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 NUMA1Q14980 2115 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 NRN1LQ496H8 165 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF805Q5CZA5 627 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 CLLU1Q5K131 121 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 C9orf64Q5T6V5 341 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF57Q68EA5 555 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 IGFL4Q6B9Z1 124 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3GQ6DHY5 549 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TYW3Q6IPR3 259 aaKnown RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3CQ6IPX1 549 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 PODNL1Q6PEZ8 512 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 DEF8Q6ZN54 512 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TECPR1Q7Z6L1 1165 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 OAFQ86UD1 273 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SLC51BQ86UW2 128 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 C17orf64Q86WR6 236 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TBC1D3Q8IZP1 549 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 RNF113BQ8IZP6 322 aaKnown RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 C9orf62Q8N4C0 152 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 HORMAD2Q8N7B1 307 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF485Q8NCK3 441 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 MORN4Q8NDC4 146 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 OR2T33Q8NG76 320 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 GPR32P1Q8NGA4 272 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 OR6K2Q8NGY2 324 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 OR52P1PQ8NH57 321 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SLC7A13Q8TCU3 470 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ACOT11Q8WXI4 607 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TM9SF4Q92544 642 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 UCN3Q969E3 161 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF503Q96F45 646 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SCMH1Q96GD3 660 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 LMLNQ96KR4 655 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SLC46A1Q96NT5 459 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ERMAPQ96PL5 475 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 FYTTD1Q96QD9 318 aaKnown RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF747Q9BV97 191 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 MS4A8Q9BY19 250 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 HDHD2Q9H0R4 259 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SERHL2Q9H4I8 314 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 CXorf36Q9H7Y0 433 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 LYARQ9NX58 379 aaKnown RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TAS2R16Q9NYV7 291 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TAAR2Q9P1P5 351 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 EIF3KQ9UBQ5 218 aaKnown RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 CLEC2DQ9UHP7 191 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 KIF25Q9UIL4 384 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 SCP2D1Q9UJQ7 156 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 ELF5Q9UKW6 265 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-203ENST00000554264 A4GNTQ9UNA3 340 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 TMEM5Q9Y2B1 443 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 CACNG2Q9Y698 323 aa5.43□□□□□ -1.54
VPS33B-203ENST00000554264 CSNK1G3Q9Y6M4 447 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms