RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CPEB3Q8NE35 698 aaKnown RBP8.8□□□□□ -1
SIX4-202ENST00000554079 OR5M8Q8NGP6 311 aa8.8□□□□□ -1
SIX4-202ENST00000554079 MAFIPQ8WZ33 124 aa8.8□□□□□ -1
SIX4-202ENST00000554079 EDAQ92838 391 aa8.8□□□□□ -1
SIX4-202ENST00000554079 SLC35A5Q9BS91 424 aa8.8□□□□□ -1
SIX4-202ENST00000554079 APMAPQ9HDC9 416 aa8.8□□□□□ -1
SIX4-202ENST00000554079 MED17Q9NVC6 651 aa8.8□□□□□ -1
SIX4-202ENST00000554079 PRODH2Q9UF12 536 aa8.8□□□□□ -1
SIX4-202ENST00000554079 IL20RAQ9UHF4 553 aa8.8□□□□□ -1
SIX4-202ENST00000554079 A0A087WUJ7 227 aa8.79□□□□□ -1
SIX4-202ENST00000554079 ELOA3CA0A087WX78 387 aaPredicted RBP8.79□□□□□ -1
SIX4-202ENST00000554079 TBC1D3BA6NDS4 549 aa8.79□□□□□ -1
SIX4-202ENST00000554079 OR52A4PA6NMU1 304 aa8.79□□□□□ -1
SIX4-202ENST00000554079 PLPP2O43688 288 aa8.79□□□□□ -1
SIX4-202ENST00000554079 IL18BPO95998 194 aa8.79□□□□□ -1
SIX4-202ENST00000554079 BCHEP06276 602 aa8.79□□□□□ -1
SIX4-202ENST00000554079 TBC1D3HP0C7X1 549 aa8.79□□□□□ -1
SIX4-202ENST00000554079 TPT1P13693 172 aaKnown RBP8.79□□□□□ -1
SIX4-202ENST00000554079 NSG1P42857 185 aa8.79□□□□□ -1
SIX4-202ENST00000554079 NAAAQ02083 359 aa8.79□□□□□ -1
SIX4-202ENST00000554079 TWF1Q12792 350 aa8.79□□□□□ -1
SIX4-202ENST00000554079 HMGN3Q15651 99 aa8.79□□□□□ -1
SIX4-202ENST00000554079 ZBTB6Q15916 424 aa8.79□□□□□ -1
SIX4-202ENST00000554079 ZNF385BQ569K4 471 aa8.79□□□□□ -1
SIX4-202ENST00000554079 CPTPQ5TA50 214 aa8.79□□□□□ -1
SIX4-202ENST00000554079 TBC1D3GQ6DHY5 549 aa8.79□□□□□ -1
SIX4-202ENST00000554079 ARHGAP11AQ6P4F7 1023 aa8.79□□□□□ -1
SIX4-202ENST00000554079 GDPD4Q6W3E5 623 aa8.79□□□□□ -1
SIX4-202ENST00000554079 LANCL3Q6ZV70 420 aa8.79□□□□□ -1
SIX4-202ENST00000554079 SYT9Q86SS6 491 aa8.79□□□□□ -1
SIX4-202ENST00000554079 RBM45Q8IUH3 476 aaKnown RBP8.79□□□□□ -1
SIX4-202ENST00000554079 ETFBKMTQ8IXQ9 262 aa8.79□□□□□ -1
SIX4-202ENST00000554079 BPIFB2Q8N4F0 458 aa8.79□□□□□ -1
SIX4-202ENST00000554079 PCSK9Q8NBP7 692 aaKnown RBP8.79□□□□□ -1
SIX4-202ENST00000554079 OR6N1Q8NGY5 312 aa8.79□□□□□ -1
SIX4-202ENST00000554079 OR5W2Q8NH69 310 aa8.79□□□□□ -1
SIX4-202ENST00000554079 GPR148Q8TDV2 347 aa8.79□□□□□ -1
SIX4-202ENST00000554079 DUSP19Q8WTR2 217 aa8.79□□□□□ -1
SIX4-202ENST00000554079 RFKQ969G6 155 aa8.79□□□□□ -1
SIX4-202ENST00000554079 HMCESQ96FZ2 354 aa8.79□□□□□ -1
SIX4-202ENST00000554079 SMIM8Q96KF7 97 aa8.79□□□□□ -1
SIX4-202ENST00000554079 PGLYRP3Q96LB9 341 aa8.79□□□□□ -1
SIX4-202ENST00000554079 TRIB3Q96RU7 358 aa8.79□□□□□ -1
SIX4-202ENST00000554079 MFRPQ9BY79 579 aa8.79□□□□□ -1
SIX4-202ENST00000554079 SLITRK2Q9H156 845 aa8.79□□□□□ -1
SIX4-202ENST00000554079 LMAN1LQ9HAT1 526 aa8.79□□□□□ -1
SIX4-202ENST00000554079 LPAR3Q9UBY5 353 aa8.79□□□□□ -1
SIX4-202ENST00000554079 FLVCR1Q9Y5Y0 555 aa8.79□□□□□ -1
SIX4-202ENST00000554079 OR5H15A6NDH6 313 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR5H1A6NKK0 313 aa8.78□□□□□ -1
SIX4-202ENST00000554079 TMEM210A6NLX4 147 aa8.78□□□□□ -1
SIX4-202ENST00000554079 G3V3G9 751 aa8.78□□□□□ -1
SIX4-202ENST00000554079 RNASET2O00584 256 aaKnown RBP8.78□□□□□ -1
SIX4-202ENST00000554079 STK16O75716 305 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ARG1P05089 322 aa8.78□□□□□ -1
SIX4-202ENST00000554079 FCGR3AP08637 254 aa8.78□□□□□ -1
SIX4-202ENST00000554079 PTHLHP12272 177 aa8.78□□□□□ -1
SIX4-202ENST00000554079 HTR1FP30939 366 aa8.78□□□□□ -1
SIX4-202ENST00000554079 IL2RGP31785 369 aa8.78□□□□□ -1
SIX4-202ENST00000554079 SULT1A1P50225 295 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ST8SIA6P61647 398 aa8.78□□□□□ -1
SIX4-202ENST00000554079 LSM11P83369 360 aaKnown RBP eCLIP8.78□□□□□ -1
SIX4-202ENST00000554079 SRSF5Q13243 272 aaKnown RBP8.78□□□□□ -1
SIX4-202ENST00000554079 DDX39BQ13838 428 aaKnown RBP8.78□□□□□ -1
SIX4-202ENST00000554079 DOC2AQ14183 400 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR7A5Q15622 319 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ISXQ2M1V0 245 aa8.78□□□□□ -1
SIX4-202ENST00000554079 GFI1BQ5VTD9 330 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR2A2Q6IF42 318 aa8.78□□□□□ -1
SIX4-202ENST00000554079 GDF6Q6KF10 455 aaPredicted RBP8.78□□□□□ -1
SIX4-202ENST00000554079 LPCAT3Q6P1A2 487 aa8.78□□□□□ -1
SIX4-202ENST00000554079 C1orf94Q6P1W5 598 aa8.78□□□□□ -1
SIX4-202ENST00000554079 C16orf54Q6UWD8 224 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ZNF664Q8N3J9 261 aa8.78□□□□□ -1
SIX4-202ENST00000554079 MORN4Q8NDC4 146 aa8.78□□□□□ -1
SIX4-202ENST00000554079 BBS1Q8NFJ9 593 aa8.78□□□□□ -1
SIX4-202ENST00000554079 STEAP2Q8NFT2 490 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR4C16Q8NGL9 310 aa8.78□□□□□ -1
SIX4-202ENST00000554079 TRAPPC12Q8WVT3 735 aa8.78□□□□□ -1
SIX4-202ENST00000554079 TMED6Q8WW62 240 aa8.78□□□□□ -1
SIX4-202ENST00000554079 SAT2Q96F10 170 aaPredicted RBP8.78□□□□□ -1
SIX4-202ENST00000554079 AKR1E2Q96JD6 320 aa8.78□□□□□ -1
SIX4-202ENST00000554079 SERINC2Q96SA4 455 aa8.78□□□□□ -1
SIX4-202ENST00000554079 S100A13Q99584 98 aa8.78□□□□□ -1
SIX4-202ENST00000554079 SMOQ99835 787 aa8.78□□□□□ -1
SIX4-202ENST00000554079 SEMA3CQ99985 751 aa8.78□□□□□ -1
SIX4-202ENST00000554079 WFDC6Q9BQY6 131 aa8.78□□□□□ -1
SIX4-202ENST00000554079 TMEM121BQ9BXQ6 578 aaPredicted RBP8.78□□□□□ -1
SIX4-202ENST00000554079 CHST6Q9GZX3 395 aa8.78□□□□□ -1
SIX4-202ENST00000554079 OR52A5Q9H2C5 316 aa8.78□□□□□ -1
SIX4-202ENST00000554079 TRIM36Q9NQ86 728 aa8.78□□□□□ -1
SIX4-202ENST00000554079 UBQLN4Q9NRR5 601 aa8.78□□□□□ -1
SIX4-202ENST00000554079 TMEM30AQ9NV96 361 aa8.78□□□□□ -1
SIX4-202ENST00000554079 KCNE5Q9UJ90 142 aa8.78□□□□□ -1
SIX4-202ENST00000554079 A4GNTQ9UNA3 340 aa8.78□□□□□ -1
SIX4-202ENST00000554079 FOXJ3Q9UPW0 622 aa8.78□□□□□ -1
SIX4-202ENST00000554079 CASP8AP2Q9UKL3 1982 aa8.78□□□□□ -1
SIX4-202ENST00000554079 A0A1W2PPE2 198 aa8.78□□□□□ -1
SIX4-202ENST00000554079 A8MXE2 369 aa8.78□□□□□ -1
SIX4-202ENST00000554079 ZNF587BE7ETH6 402 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms