RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 LRTM1Q9HBL6 345 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 PALMDQ9NP74 551 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 YAE1D1Q9NRH1 226 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 UBQLN4Q9NRR5 601 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 C1orf109Q9NX04 203 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 KLHL13Q9P2N7 655 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 GIMAP2Q9UG22 337 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 LIPT1Q9Y234 373 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 CCL27Q9Y4X3 112 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ORC6Q9Y5N6 252 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 HSPE1-MOB4S4R3N1 261 aa7.86□□□□□ -1.15
TDP1-208ENST00000553989 ROS1P08922 2347 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 A0A096LPI6 279 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 SH3PXD2BA1X283 911 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 J3QL48 77 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 EI24O14681 340 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 KCNK2O95069 426 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ADAP00813 363 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 RPLP1P05386 114 aaKnown RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 NGFRP08138 427 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 SOD3P08294 240 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 IFI6P09912 130 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ACP2P11117 423 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ZNF12P17014 697 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 EFNA1P20827 205 aaPredicted RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 PRPH2P23942 346 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ELK4P28324 431 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 RYKP34925 604 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ACVR1BP36896 505 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 EIF1P41567 113 aaKnown RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 PRIM2P49643 509 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 RNF144AP50876 292 aaPredicted RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 CCR4P51679 360 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 RAD23AP54725 363 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 GABARAPL2P60520 117 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 RPL38P63173 70 aaKnown RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 POU6F2P78424 691 aaPredicted RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 TAB1Q15750 504 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 CD226Q15762 336 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 DUSP5Q16690 384 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 TMEM176BQ3YBM2 270 aaPredicted RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 RFTN2Q52LD8 501 aaPredicted RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 NCMAPQ5T1S8 102 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 SFRP5Q5T4F7 317 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ADAM5Q6NVV9 412 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 SLC2A7Q6PXP3 512 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 TFAP2EQ6VUC0 442 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 KCTD8Q6ZWB6 473 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 FCRLAQ7L513 359 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ZAR1Q86SH2 424 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 MICU2Q8IYU8 434 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 CLEC4FQ8N1N0 589 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 TMCO5AQ8N6Q1 288 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ZNF527Q8NB42 609 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 SLC16A11Q8NCK7 471 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 KBTBD8Q8NFY9 601 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 OR2T11Q8NH01 316 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 CLHC1Q8NHS4 586 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.85□□□□□ -1.15
TDP1-208ENST00000553989 RNF128Q8TEB7 428 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 HSD17B8Q92506 261 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 GTF2H4Q92759 462 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 NEUROG1Q92886 237 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 BORCS5Q969J3 196 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 TMIGD2Q96BF3 282 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ISOC1Q96CN7 298 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 TEX37Q96LM6 180 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 SEPHS2Q99611 448 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 SRXN1Q9BYN0 137 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 POTEKPQ9BYX7 375 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 REEP4Q9H6H4 257 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 ZCCHC3Q9NUD5 404 aaKnown RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 TBC1D23Q9NUY8 699 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 FAIMQ9NVQ4 179 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 GIN1Q9NXP7 522 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 MAGED1Q9Y5V3 778 aaPredicted RBP7.85□□□□□ -1.15
TDP1-208ENST00000553989 PTGDR2Q9Y5Y4 395 aa7.85□□□□□ -1.15
TDP1-208ENST00000553989 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 IGHV3-15A0A0B4J1V0 119 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 NPIPA5A0A0B4J1W7 369 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 EVPLLA8MZ36 301 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 FAM220BPB1ANY3 271 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 NPIPA7E9PJI5 369 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 GTPBP1O00178 669 aaKnown RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 CXCR6O00574 342 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 SLC16A6O15403 523 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 TPST1O60507 370 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 ADAM11O75078 769 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 GCM2O75603 506 aaPredicted RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 PRKD3O94806 890 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 ALPLP05186 524 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 PGRP06401 933 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 NPIPA8P0DM63 369 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 NCK1P16333 377 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 DDX5P17844 614 aaKnown RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 CCNA2P20248 432 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 EEF1B2P24534 225 aaKnown RBP7.84□□□□□ -1.15
TDP1-208ENST00000553989 ADH6P28332 368 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 SHC1P29353 583 aa7.84□□□□□ -1.15
TDP1-208ENST00000553989 LCN1P31025 176 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms