RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ZNF175Q9Y473 711 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CCL27Q9Y4X3 112 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 TIMM22Q9Y584 194 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PTGDR2Q9Y5Y4 395 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 SLC25A15Q9Y619 301 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 DNAH9Q9NYC9 4486 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 A0A1W2PP18 115 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM89A2RUT3 159 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SYNDIG1LA6NDD5 238 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 PABPN1LA6NDY0 278 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 A8MT66 165 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 FAM157AC9JC47 383 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 PGRMC1O00264 195 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 ABCD4O14678 606 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SMAD9O15198 467 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 RAD51CO43502 376 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 PLOD3O60568 738 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 IPO7O95373 1038 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 UTS2O95399 124 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 IFNA2P01563 188 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TUBBP07437 444 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 ITGA5P08648 1049 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SRD5A1P18405 259 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 CSNK2A2P19784 350 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 COX5AP20674 150 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TLX1P31314 330 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 GABRA3P34903 492 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SFTPDP35247 375 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 HSD17B3P37058 310 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TMED10P49755 219 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 ARFIP1P53367 373 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 MAPK12P53778 367 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SLC12A2P55011 1212 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 CDH11P55287 796 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SUMO3P55854 103 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 P2RX3P56373 397 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF117Q03924 483 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SLC18A2Q05940 514 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TGM3Q08188 693 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 LGALS3BPQ08380 585 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 PTGR1Q14914 329 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 KIAA0040Q15053 153 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 PPP1R7Q15435 360 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SGCBQ16585 318 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 DUSP5Q16690 384 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 HIST2H2ACQ16777 129 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 GGTA1PQ4G0N0 100 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 FRG2Q64ET8 278 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 CYB5R2Q6BCY4 276 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 HIST2H2AA3Q6FI13 130 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 OR2A2Q6IF42 318 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 FAM71E1Q6IPT2 247 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 PPP4R4Q6NUP7 873 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 AAGABQ6PD74 315 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM107Q6UX40 140 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 C3orf62Q6ZUJ4 267 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 LINGO2Q7L985 606 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 BHLHA15Q7RTS1 189 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 MYLK4Q86YV6 388 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 WDFY1Q8IWB7 410 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 PDIK1LQ8N165 341 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 FBXL14Q8N1E6 418 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 OR2L13Q8N349 312 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 GTPBP8Q8N3Z3 284 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 IQCF1Q8N6M8 205 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF433Q8N7K0 673 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TRIM58Q8NG06 486 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 OR52E4Q8NGH9 312 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 OR52N5Q8NH56 324 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 OR2V1Q8NHB1 315 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 RHEBL1Q8TAI7 183 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 FBXO30Q8TB52 745 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 STAG3L4Q8TBR4 150 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TRPC4APQ8TEL6 797 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 CIDECQ96AQ7 238 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 TMCO6Q96DC7 493 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 LRRC39Q96DD0 335 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 MTBPQ96DY7 904 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 ELP4Q96EB1 424 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SH3YL1Q96HL8 342 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 FRG2BQ96QU4 278 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 HIST1H2AAQ96QV6 131 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SERPINI1Q99574 410 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 CPNE1Q99829 537 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SLC39A3Q9BRY0 314 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 LMF2Q9BU23 707 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 RSPO3Q9BXY4 272 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 BEX2Q9BXY8 128 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 BPESC1Q9GZL8 116 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 OR10A4Q9H209 315 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 CNOT10Q9H9A5 744 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 LRTM1Q9HBL6 345 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 MOV10Q9HCE1 1003 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 PAPOLBQ9NRJ5 636 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SIRT3Q9NTG7 399 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 CBLN4Q9NTU7 201 aa2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 CPSF2Q9P2I0 782 aaKnown RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 C19orf53Q9UNZ5 99 aaPredicted RBP2.72□□□□□ -1.97
SLIRP-202ENST00000553981 SLC12A4Q9UP95 1085 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms