RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 STK35Q8TDR2 534 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 HAS2Q92819 552 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 OSTF1Q92882 214 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 HRASLS5Q96KN8 279 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 JSRP1Q96MG2 331 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 TNFRSF10DQ9UBN6 386 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 B4GALT7Q9UBV7 327 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 REV1Q9UBZ9 1251 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 TINAGQ9UJW2 476 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 DKKL1Q9UK85 242 aa13.04□□□□□ -0.32
SHMT2-208ENST00000553868 NDRG4Q9ULP0 352 aaKnown RBP13.04□□□□□ -0.32
SHMT2-208ENST00000553868 TRAV36DV7A0A075B6V5 113 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 C17orf51A8MQB3 221 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 A8MVM7 634 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 SUSD5O60279 629 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 NEURL1O76050 574 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 CHMP24386 653 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 POU1F1P28069 291 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 GGT2P36268 569 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 POLR2IP36954 125 aaKnown RBP13.03□□□□□ -0.32
SHMT2-208ENST00000553868 CDC42P60953 191 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 ARG2P78540 354 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 FOXF1Q12946 379 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 C3AR1Q16581 482 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 GLYR1Q49A26 553 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-208ENST00000553868 ZNF691Q5VV52 312 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 THAP5Q7Z6K1 395 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 C10orf53Q8N6V4 93 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 OR52L1Q8NGH7 329 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 ZNF570Q96NI8 536 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 PROK2Q9HC23 129 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 MEPEQ9NQ76 525 aaPredicted RBP13.03□□□□□ -0.32
SHMT2-208ENST00000553868 PNPLA3Q9NST1 481 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 IMPAD1Q9NX62 359 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 FBXL2Q9UKC9 423 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 VDAC3Q9Y277 283 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 CDH10Q9Y6N8 788 aa13.03□□□□□ -0.32
SHMT2-208ENST00000553868 IGKV1D-42A0A075B6H8 117 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ZAR1LA6NP61 321 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 G3V3Y1 287 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 KLRC4-KLRK1H3BQV0 150 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF208O43345 1280 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 OR2T1O43869 369 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 MPZL2O60487 215 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 OR7A10O76100 309 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 SOX14O95416 240 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 AHSA1O95433 338 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 NTN1O95631 604 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 BMP7P18075 431 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 HK1P19367 917 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 AGAP20933 346 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 DPP4P27487 766 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 DNASE1L1P49184 302 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 SMSP52788 366 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 LSM11P83369 360 aaKnown RBP eCLIP13.02□□□□□ -0.33
SHMT2-208ENST00000553868 MFSD13AQ14CX5 517 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 PTGES3Q15185 160 aaKnown RBP13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ANKDD1AQ495B1 522 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 SPINK14Q6IE38 97 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 SLC25A25Q6KCM7 469 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 POMZP3Q6PJE2 187 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ARSKQ6UWY0 536 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF620Q6ZNG0 422 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 OAFQ86UD1 273 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 TMEM200AQ86VY9 491 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF227Q86WZ6 799 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ADGRG3Q86Y34 549 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 TMEM178AQ8NBL3 297 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 MDS2Q8NDY4 140 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 OR6S1Q8NH40 331 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 FANK1Q8TC84 345 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 SLC25A43Q8WUT9 341 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-208ENST00000553868 DDIT4LQ96D03 193 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 MUS81Q96NY9 551 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 GPA33Q99795 319 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 KLHDC3Q9BQ90 382 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ZFP64Q9NPA5 681 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 C20orf141Q9NUB4 165 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 TBC1D23Q9NUY8 699 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 CHRNA9Q9UGM1 479 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF337Q9Y3M9 751 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 ATRQ13535 2644 aa13.02□□□□□ -0.33
SHMT2-208ENST00000553868 E9PQ18 207 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 MT-ATP6P00846 226 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 HIST1H2ABP04908 130 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 SP1P08047 785 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 GNAO1P09471 354 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 FOSL1P15407 271 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 ZNF17P17021 662 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 CCNA2P20248 432 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 MAKP20794 623 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 PTNP21246 168 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 ELK4P28324 431 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 SRD5A2P31213 254 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
SHMT2-208ENST00000553868 CHN2P52757 468 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 IL5RAQ01344 420 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 SELENBP1Q13228 472 aa13.01□□□□□ -0.33
SHMT2-208ENST00000553868 ZBED5Q49AG3 693 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms