RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TM7SF2O76062 418 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF44P15621 663 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 PBLDP30039 288 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 CYLC1P35663 651 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 ACVR1BP36896 505 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 MAGEA5P43359 124 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 RGS4P49798 205 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 OTUD4Q01804 1114 aaKnown RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 PJVKQ0ZLH3 352 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 FUT7Q11130 342 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 ZP4Q12836 540 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 DDX39BQ13838 428 aaKnown RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 EBI3Q14213 229 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 IMMTQ16891 758 aaKnown RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 ZSWIM7Q19AV6 140 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 EXOC3L2Q2M3D2 409 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 RABL6Q3YEC7 729 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 KCTD21Q4G0X4 260 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 METTL11BQ5VVY1 283 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 MEDAGQ5VYS4 303 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 TTC23Q5W5X9 447 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 EFL1Q7Z2Z2 1120 aaKnown RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 LHFPL4Q7Z7J7 247 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 KIAA1328Q86T90 577 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 CTAGE6Q86UF2 777 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF683Q8IZ20 524 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 EIF1ADQ8N9N8 165 aaKnown RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 ZSCAN4Q8NAM6 433 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 SYT14Q8NB59 555 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 BHLHE23Q8NDY6 225 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 OR5AU1Q8NGC0 362 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 SPRYD4Q8WW59 207 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 P3H4Q92791 437 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 MARC2Q969Z3 335 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 SLC25A36Q96CQ1 311 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 STARD4Q96DR4 205 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 OMDQ99983 421 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 SLC30A2Q9BRI3 323 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 TBC1D10AQ9BXI6 508 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 Q9H3A6 140 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 ALG9Q9H6U8 611 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 CYTL1Q9NRR1 136 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 AGPAT5Q9NUQ2 364 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 NMRK1Q9NWW6 199 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 AIPL1Q9NZN9 384 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 GALPQ9UBC7 116 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 PURGQ9UJV8 347 aaKnown RBP2.44□□□□□ -2.02
SCFD1-210ENST00000553693 B9D1Q9UPM9 204 aa2.44□□□□□ -2.02
SCFD1-210ENST00000553693 PIEZO1Q92508 2521 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 IGLV3-16A0A075B6K0 115 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 GOLGA8SH3BPF8 625 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 AP3B1O00203 1094 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 OR7A17O14581 309 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 POLR2DO15514 142 aaKnown RBP2.43□□□□□ -2.02
SCFD1-210ENST00000553693 LATO43561 262 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 SPAG6O75602 509 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 GPX5O75715 221 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 CNMDO75829 334 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 IGFBP1P08833 259 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-210ENST00000553693 CCDC130P13994 396 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 ATP5A1P25705 553 aaKnown RBP2.43□□□□□ -2.02
SCFD1-210ENST00000553693 GDI1P31150 447 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 ACADVLP49748 655 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 AIF1P55008 147 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF45Q02386 682 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 PUDPQ08623 228 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 GTF3C1Q12789 2109 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 MRPL28Q13084 256 aaKnown RBP2.43□□□□□ -2.02
SCFD1-210ENST00000553693 SELPLGQ14242 412 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 RAB35Q15286 201 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 MPPED2Q15777 294 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 UBE2V2Q15819 145 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 SSX2Q16385 188 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 CYBRD1Q53TN4 286 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 MFSD14CQ5VZR4 134 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 OR8G2PQ6IF36 304 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 SLC39A4Q6P5W5 647 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF562Q6V9R5 426 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 SYT10Q6XYQ8 523 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 CCDC80Q76M96 950 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 RUFY3Q7L099 469 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 TGIF2LXQ8IUE1 241 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF679Q8IYX0 411 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 UBE2J2Q8N2K1 259 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 ZCCHC7Q8N3Z6 543 aaKnown RBP2.43□□□□□ -2.02
SCFD1-210ENST00000553693 BBS1Q8NFJ9 593 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 OR4F17Q8NGA8 305 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 ART4Q93070 314 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 FBXO32Q969P5 355 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 OR4F4Q96R69 305 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 RIT2Q99578 217 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 TSSK1BQ9BXA7 367 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 MEAF6Q9HAF1 191 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 ZNF331Q9NQX6 463 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-210ENST00000553693 NEU3Q9UQ49 428 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 SLCO1B1Q9Y6L6 691 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 MUC6Q6W4X9 2439 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 CACNA1AO00555 2505 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 A0A1B0GUL6 1792 aa2.43□□□□□ -2.02
SCFD1-210ENST00000553693 PHIPQ8WWQ0 1821 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms