RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ART1P52961 327 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 ZAR1Q86SH2 424 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 TM4SF19Q96DZ7 209 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 ENTPD2Q9Y5L3 495 aa16.1■□□□□ 0.17
SYNE3-202ENST00000553340 ZNF860A6NHJ4 632 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 KRBOX1C9JBD0 128 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 MCIDASD6RGH6 385 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 SUSD5O60279 629 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 NMBP08949 121 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 CDK2P24941 298 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 ITGB8P26012 769 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 AK4P27144 223 aaPredicted RBP16.09■□□□□ 0.17
SYNE3-202ENST00000553340 S100A11P31949 105 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 RPL4P36578 427 aaKnown RBP16.09■□□□□ 0.17
SYNE3-202ENST00000553340 ARSKQ6UWY0 536 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 SLC35F3Q8IY50 421 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 OR6M1Q8NGM8 313 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 OR6K6Q8NGW6 343 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 RIT1Q92963 219 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 CXorf58Q96LI9 332 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 RNF208Q9H0X6 261 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 PFDN2Q9UHV9 154 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 ADAM18Q9Y3Q7 739 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 A0A1W2PP55 124 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 FGF17O60258 216 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 RP2O75695 350 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 B3GALNT1O75752 331 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 PTHLHP12272 177 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 ACAA2P42765 397 aaKnown RBP16.09■□□□□ 0.17
SYNE3-202ENST00000553340 PRMT2P55345 433 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 SEC61A1P61619 476 aaKnown RBP16.09■□□□□ 0.17
SYNE3-202ENST00000553340 HLXQ14774 488 aaPredicted RBP16.09■□□□□ 0.17
SYNE3-202ENST00000553340 SLC35D3Q5M8T2 416 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 ZBTB44Q8NCP5 570 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 COQ8AQ8NI60 647 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 SCARB1Q8WTV0 552 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 ZNRF4Q8WWF5 429 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 NSMAFQ92636 917 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 OR2A5Q96R48 311 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 SLITRK2Q9H156 845 aa16.09■□□□□ 0.17
SYNE3-202ENST00000553340 ADAM11O75078 769 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 ZFPL1O95159 310 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 LDOC1O95751 146 aaPredicted RBP16.08■□□□□ 0.17
SYNE3-202ENST00000553340 POU3F2P20265 443 aaPredicted RBP16.08■□□□□ 0.17
SYNE3-202ENST00000553340 MAP3K8P41279 467 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 WASP42768 502 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 MAGEB1P43366 347 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 PDGFRLQ15198 375 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 PRICKLE4Q2TBC4 344 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 SFRP5Q5T4F7 317 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 B3GNTL1Q67FW5 361 aaPredicted RBP16.08■□□□□ 0.17
SYNE3-202ENST00000553340 OVCH2Q7RTZ1 564 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 RPS4Y2Q8TD47 263 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 ST8SIA4Q92187 359 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 SMARCD2Q92925 531 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 MIB2Q96AX9 1013 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 SLC22A18Q96BI1 424 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 ZNF707Q96C28 371 aaPredicted RBP16.08■□□□□ 0.17
SYNE3-202ENST00000553340 NMNAT3Q96T66 252 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 SHARPINQ9H0F6 387 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 CAPN10Q9HC96 672 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 ZC4H2Q9NQZ6 224 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 SPACA6W5XKT8 324 aa16.08■□□□□ 0.17
SYNE3-202ENST00000553340 UBE2QL1A1L167 161 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 IDSB3KWA1 339 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 PPM1BO75688 479 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 HIST1H2ABP04908 130 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 DLX5P56178 289 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 TAS2R20P59543 309 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 KIAA1024LP59773 190 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 NANOS3P60323 173 aaKnown RBP16.08■□□□□ 0.16
SYNE3-202ENST00000553340 CBFBQ13951 182 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 ALKAL2Q6UX46 152 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 VITQ6UXI7 678 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 NHLRC1Q6VVB1 395 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 ABHD13Q7L211 337 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 HIST3H2AQ7L7L0 130 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 DNAAF1Q8NEP3 725 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 HIST1H2ACQ93077 130 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 SGTBQ96EQ0 304 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 DPYSL5Q9BPU6 564 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 SRMSQ9H3Y6 488 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 TCF7L1Q9HCS4 588 aa16.08■□□□□ 0.16
SYNE3-202ENST00000553340 MKKSQ9NPJ1 570 aaPredicted RBP16.08■□□□□ 0.16
SYNE3-202ENST00000553340 HMSDA8MTL9 139 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 PSMD9O00233 223 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 GNB5O14775 395 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 ARPC5O15511 151 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 GPR75O95800 540 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 SPI1P17947 270 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 MNDAP41218 407 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 EMDP50402 254 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 FAM78AQ5JUQ0 283 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 ULK3Q6PHR2 472 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 LINC00114Q6XXX2 140 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 TMEFF1Q8IYR6 380 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 NPEPL1Q8NDH3 523 aa16.07■□□□□ 0.16
SYNE3-202ENST00000553340 RGP1Q92546 391 aaPredicted RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 WDR89Q96FK6 387 aaPredicted RBP16.07■□□□□ 0.16
SYNE3-202ENST00000553340 TTYH1Q9H313 450 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms