RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 GATA2P23769 480 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-209ENST00000553280 PRKAR2BP31323 418 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 OTX1P32242 354 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-209ENST00000553280 IFNA8P32881 189 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 FDFT1P37268 417 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 BTDP43251 543 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 C21orf59P57076 290 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 TLE4Q04727 773 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 LPAL2Q16609 132 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 PRR30Q53SZ7 412 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-209ENST00000553280 TCTEX1D4Q5JR98 221 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 UTF1Q5T230 341 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 UNQ9370/PRO34162Q6UXP9 181 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 CENPQQ7L2Z9 268 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-209ENST00000553280 VRK2Q86Y07 508 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 CCDC71LQ8N9Z2 235 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 TYMSOSQ8TAI1 123 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 ACMSDQ8TDX5 336 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 FAM222BQ8WU58 562 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 CHCHD10Q8WYQ3 142 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-209ENST00000553280 FGF11Q92914 225 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 FOXN4Q96NZ1 517 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 TGS1Q96RS0 853 aaKnown RBP3.76□□□□□ -1.81
SCFD1-209ENST00000553280 MFFQ9GZY8 342 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 ANKRA2Q9H9E1 313 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 CRLF2Q9HC73 371 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 Q9UF83 564 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 NUP50Q9UKX7 468 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 TRBV11-1A0A0K0K1C0 115 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 WRBO00258 174 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 MBTPS2O43462 519 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 BCL2L11O43521 198 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 CRLF1O75462 422 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 KLK3P07288 261 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF43P17038 809 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 TBPP20226 339 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 PRDX3P30048 256 aaKnown RBP3.75□□□□□ -1.81
SCFD1-209ENST00000553280 SHMT2P34897 504 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 HSD17B2P37059 387 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 KIR2DS4P43632 304 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 YAP1P46937 504 aaKnown RBP3.75□□□□□ -1.81
SCFD1-209ENST00000553280 GSSP48637 474 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 GPM6AP51674 278 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 ACLYP53396 1101 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 RGS8P57771 180 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-209ENST00000553280 EGFEM1PQ0D2K5 195 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 IL18Q14116 193 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 TGFBIQ15582 683 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 VPS26BQ4G0F5 336 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 SLC8B1Q6J4K2 584 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 CLEC2AQ6UVW9 174 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 BAIAP2L2Q6UXY1 529 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 LUZP2Q86TE4 346 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF677Q86XU0 584 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 MFSD6LQ8IWD5 586 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF485Q8NCK3 441 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 BBOF1Q8ND07 529 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 OR9A1PQ8NGU1 263 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 SLC22A8Q8TCC7 542 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 GPR151Q8TDV0 419 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 PYROXD1Q8WU10 500 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 STMN2Q93045 179 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 SLC38A4Q969I6 547 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 NEIL2Q969S2 332 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 CMTM7Q96FZ5 175 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 TECTBQ96PL2 329 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 PANX1Q96RD7 426 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 HIST1H4GQ99525 98 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 C11orf70Q9BRQ4 267 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF160Q9HCG1 818 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 PSME2Q9UL46 239 aa3.75□□□□□ -1.81
SCFD1-209ENST00000553280 CACNA1FO60840 1977 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 TMEM110-MUSTN1A8MSY1 372 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 IGHV3-48P01763 117 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 IGHV3-23P01764 117 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 FGF1P05230 155 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 ABOP16442 354 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF24P17028 368 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 P2RY4P51582 365 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 RPS15P62841 145 aaKnown RBP3.74□□□□□ -1.81
SCFD1-209ENST00000553280 ALKBH6Q3KRA9 238 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 TFAP2EQ6VUC0 442 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 C19orf35Q6ZS72 473 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 RDH10Q8IZV5 341 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 SLC39A11Q8N1S5 342 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF525Q8N782 197 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 B3GNT7Q8NFL0 401 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 PLPPR1Q8TBJ4 325 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF578Q96N58 590 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-209ENST00000553280 DEFB126Q9BYW3 111 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 EHD1Q9H4M9 534 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 GEMIN7Q9H840 131 aaKnown RBP3.74□□□□□ -1.81
SCFD1-209ENST00000553280 INPP5EQ9NRR6 644 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 GIN1Q9NXP7 522 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 KIF25Q9UIL4 384 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 UGT2A1Q9Y4X1 527 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 V9GY05 133 aa3.74□□□□□ -1.81
SCFD1-209ENST00000553280 FANCIQ9NVI1 1328 aa3.73□□□□□ -1.81
SCFD1-209ENST00000553280 NCF1BA6NI72 391 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms