RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TNFSF9P41273 254 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 GRIA3P42263 894 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 RBM34P42696 430 aaKnown RBP5.45□□□□□ -1.54
VPS29-210ENST00000552130 CRISP1P54107 249 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 ID2Q02363 134 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 SRSF1Q07955 248 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS29-210ENST00000552130 CDC20Q12834 499 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 NAB1Q13506 487 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 DUSP6Q16828 381 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 ZNF284Q2VY69 593 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 TMEM249Q2WGJ8 235 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 TPRG1LQ5T0D9 272 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 IDNKQ5T6J7 187 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 SLC25A47Q6Q0C1 308 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 FAM57BQ71RH2 274 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 ASCL5Q7RTU5 278 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 APTXQ7Z2E3 356 aaKnown RBP5.45□□□□□ -1.54
VPS29-210ENST00000552130 CYP4Z2PQ8N1L4 340 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 OR4D9Q8NGE8 314 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 OR2L2Q8NH16 312 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 OR52N5Q8NH56 324 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 MAGEC3Q8TD91 643 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 TMEM255BQ8WV15 326 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 CDS1Q92903 461 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 DLX4Q92988 240 aaPredicted RBP5.45□□□□□ -1.54
VPS29-210ENST00000552130 RPEQ96AT9 228 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 C4orf45Q96LM5 186 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 RNF145Q96MT1 663 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 MICU1Q9BPX6 476 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 PAPOLGQ9BWT3 736 aaKnown RBP5.45□□□□□ -1.54
VPS29-210ENST00000552130 NAA50Q9GZZ1 169 aaKnown RBP5.45□□□□□ -1.54
VPS29-210ENST00000552130 NHEJ1Q9H9Q4 299 aaPredicted RBP5.45□□□□□ -1.54
VPS29-210ENST00000552130 BEX1Q9HBH7 125 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 FZD3Q9NPG1 666 aa5.45□□□□□ -1.54
VPS29-210ENST00000552130 USP42Q9H9J4 1324 aaKnown RBP5.45□□□□□ -1.54
VPS29-210ENST00000552130 A8MX80 341 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 E5RJQ4 531 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 TNFSF11O14788 317 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 RBMXL2O75526 392 aaKnown RBP5.44□□□□□ -1.54
VPS29-210ENST00000552130 FGF19O95750 216 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 CD160O95971 181 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 IGSF6O95976 241 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 IGHG4P01861 327 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 TFAP2AP05549 437 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 UMODP07911 640 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 HBQ1P09105 142 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 COL11A2P13942 1736 aaPredicted RBP5.44□□□□□ -1.54
VPS29-210ENST00000552130 MGMTP16455 207 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 CMA1P23946 247 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 CXCR2P25025 360 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 FASP25445 335 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 MAP3K8P41279 467 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 PRLHRP49683 370 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 B3GALT5-AS1P59052 145 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 HSF1Q00613 529 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 TPBGQ13641 420 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 SLC36A2Q495M3 483 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 GTDC1Q4AE62 458 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 TMEM35AQ53FP2 167 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 SPOPLQ6IQ16 392 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 FAHD1Q6P587 224 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 SPESP1Q6UW49 350 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 METTL7BQ6UX53 244 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 CERS6Q6ZMG9 384 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.44□□□□□ -1.544e-10■■■■□ 25.2
VPS29-210ENST00000552130 SSX6Q7RTT6 188 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 NUFIP2Q7Z417 695 aaKnown RBP5.44□□□□□ -1.54
VPS29-210ENST00000552130 HSD11B1LQ7Z5J1 315 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 ARHGEF19Q8IW93 802 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 PGAM4Q8N0Y7 254 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 MS4A15Q8N5U1 240 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 C8orf46Q8TAG6 207 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 AENQ8WTP8 325 aaKnown RBP5.44□□□□□ -1.54
VPS29-210ENST00000552130 ZBED6CLQ96FA7 236 aaPredicted RBP5.44□□□□□ -1.54
VPS29-210ENST00000552130 MBOAT7Q96N66 472 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 KCNA7Q96RP8 456 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 MCCC1Q96RQ3 725 aaPredicted RBP5.44□□□□□ -1.54
VPS29-210ENST00000552130 CPXM1Q96SM3 734 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 ZYG11BQ9C0D3 744 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 MMP28Q9H239 520 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 NRN1Q9NPD7 142 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 ICAM5Q9UMF0 924 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 SLC22A13Q9Y226 551 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 WIF1Q9Y5W5 379 aa5.44□□□□□ -1.54
VPS29-210ENST00000552130 A0A1W2PQL4 384 aaPredicted RBP5.43□□□□□ -1.54
VPS29-210ENST00000552130 DCTN6O00399 190 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 EIF4E2O60573 245 aaKnown RBP5.43□□□□□ -1.54
VPS29-210ENST00000552130 PFKFB2O60825 505 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 C1orf105O95561 183 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 IFNA5P01569 189 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 FGF2P09038 288 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 HSPD1P10809 573 aaKnown RBP5.43□□□□□ -1.54
VPS29-210ENST00000552130 ABOP16442 354 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 CTRB1P17538 263 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 POLR2EP19388 210 aaKnown RBP5.43□□□□□ -1.54
VPS29-210ENST00000552130 GNLYP22749 145 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 ALDH3A1P30838 453 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 OPRD1P41143 372 aa5.43□□□□□ -1.54
VPS29-210ENST00000552130 DNASE1L1P49184 302 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms