RNA–Protein interactions for RNA: ENST00000551931.5

LETMD1-231, Transcript of LETM1 domain containing 1, human

TSL 3

Gene LETMD1, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-231	ENST00000551931	IDH3G	P51553	393 aa	Predicted RBP	10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	CLNS1A	P54105	237 aa	Known RBP	10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	UBE2N	P61088	152 aa	Known RBP	10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	ABCE1	P61221	599 aa	Known RBP	10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	UFM1	P61960	85 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	HGFAC	Q04756	655 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	IFFO1	Q0D2I5	559 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	SQLE	Q14534	574 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	GSTA3	Q16772	222 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	ZSWIM7	Q19AV6	140 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	NIPAL3	Q6P499	406 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	VRK2	Q86Y07	508 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	CADM2	Q8N3J6	435 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	PANX1	Q96RD7	426 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	NUF2	Q9BZD4	464 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	PIF1	Q9H611	641 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	MTHFD2L	Q9H903	347 aa	Predicted RBP	10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	RAP2C	Q9Y3L5	183 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	WNK2	Q9Y3S1	2297 aa		10.91	□□□□□ -0.66
LETMD1-231	ENST00000551931	DSPP	Q9NZW4	1301 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	ZNF503-AS2	A6NEH8	195 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931		A8MVM7	634 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	LILRA1	O75019	489 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	NPIPB7	O75200	414 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	IGKV3-15	P01624	115 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	IGFBP1	P08833	259 aa	Predicted RBP	10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	TACSTD2	P09758	323 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	PRG2	P13727	222 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	DAO	P14920	347 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	LBP	P18428	481 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	GIF	P27352	417 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	THBS4	P35443	961 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	RPL14	P50914	215 aa	Known RBP	10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	GNA13	Q14344	377 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	C3orf36	Q3SXR2	165 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	C1orf140	Q5VVS0	124 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	PRAMEF8	Q5VWM4	474 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	PRAMEF7	Q5VXH5	474 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	LIPN	Q5VXI9	398 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	WBP2NL	Q6ICG8	309 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	ZNF621	Q6ZSS3	439 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	PEX5L	Q8IYB4	626 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	ZNF440	Q8IYI8	595 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	KDM8	Q8N371	416 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	SVOPL	Q8N434	492 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	ZNF540	Q8NDQ6	660 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	NUP37	Q8NFH4	326 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	OR52P1P	Q8NH57	321 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	DOK1	Q99704	481 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	TAPBPL	Q9BX59	468 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	RAB1B	Q9H0U4	201 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	SLC6A13	Q9NSD5	602 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	CHST2	Q9Y4C5	530 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	PKD1L1	Q8TDX9	2849 aa		10.9	□□□□□ -0.66
LETMD1-231	ENST00000551931	TMEM129	A0AVI4	362 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	TMEM229A	B2RXF0	380 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	FTCDNL1	E5RQL4	147 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	hCG_2039718	K7EN88	272 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	VAMP5	O95183	116 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	ITGA2	P17301	1181 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	APEX1	P27695	318 aa	Known RBP	10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	SLC1A6	P48664	564 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	ANXA11	P50995	505 aa	Known RBP	10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	CHN2	P52757	468 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	MVD	P53602	400 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	VSNL1	P62760	191 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	ROR2	Q01974	943 aa	Known RBP	10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	TRIP10	Q15642	601 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	OGFOD2	Q6N063	350 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	CLIP4	Q8N3C7	705 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	RFLNB	Q8N5W9	214 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	TRIML2	Q8N7C3	387 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	OR4F15	Q8NGB8	312 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	ZNF317	Q96PQ6	595 aa	Predicted RBP	10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	OR52E6	Q96RD3	313 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	SNX18	Q96RF0	628 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	LINC00470	Q9BZP3	86 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	ROPN1B	Q9BZX4	212 aa	Predicted RBP	10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	ZNF442	Q9H7R0	627 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	MEAF6	Q9HAF1	191 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	AIG1	Q9NVV5	245 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	SEC14L4	Q9UDX3	406 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	HAO1	Q9UJM8	370 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	MEGF8	Q7Z7M0	2845 aa		10.89	□□□□□ -0.67
LETMD1-231	ENST00000551931	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	SH3PXD2B	A1X283	911 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	OR6C65	A6NJZ3	312 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	TCF21	O43680	179 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	ZNF432	O94892	652 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	TFPT	P0C1Z6	253 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	PNMT	P11086	282 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	ETFA	P13804	333 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	NPR2	P20594	1047 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	BGN	P21810	368 aa		10.88	□□□□□ -0.67
LETMD1-231	ENST00000551931	PAX7	P23759	505 aa		10.88	□□□□□ -0.67

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