RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ACOXLQ9NUZ1 547 aa16.9■□□□□ 0.3
PRPF40B-208ENST00000548436 RBFOX1Q9NWB1 397 aaKnown RBP16.9■□□□□ 0.3
PRPF40B-208ENST00000548436 GNG8Q9UK08 70 aa16.9■□□□□ 0.3
PRPF40B-208ENST00000548436 RBMX2Q9Y388 322 aaKnown RBP16.9■□□□□ 0.3
PRPF40B-208ENST00000548436 ARID1BQ8NFD5 2236 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-208ENST00000548436 A0A1B0GVC2 190 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 HMX3A6NHT5 357 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 A6NIN4 97 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 FAM171A2A8MVW0 826 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 IGF2P01344 180 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 RPS11P62280 158 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 ZP2Q05996 745 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 SMAD2Q15796 467 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 LINC01590Q5TEZ4 76 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 UTS2BQ765I0 119 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 FAM122BQ7Z309 247 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 SYT9Q86SS6 491 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 Q8N9G6 341 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 OIT3Q8WWZ8 545 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 ZC3HAV1LQ96H79 300 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 ZNF346Q9UL40 294 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 MRPS17Q9Y2R5 130 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 CABIN1Q9Y6J0 2220 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 ADAMTS20P59510 1910 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 C17orf51A8MQB3 221 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 LYRM1O43325 122 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 GMFGO60234 142 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 CSF2RBP32927 897 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 PSMB10P40306 273 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 ELAVL1Q15717 326 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 TBRG1Q3YBR2 411 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 C9orf40Q8IXQ3 194 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 ZNF486Q96H40 463 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 TSSK2Q96PF2 358 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 SMAD5Q99717 465 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 CTRCQ99895 268 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 RPRD1BQ9NQG5 326 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 N6AMT1Q9Y5N5 214 aa16.89■□□□□ 0.29
PRPF40B-208ENST00000548436 TRBV2A0A0J9YWF9 115 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 TCRBV16S1A1N1A0A5B0 115 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 GLCEO94923 617 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 ASAH2BP0C7U1 165 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 PRKAR1AP10644 381 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 TFPIP10646 304 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 PSKH1P11801 424 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 RAB3BP20337 219 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 NPR2P20594 1047 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 DDOSTP39656 456 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 QPRTQ15274 297 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 SLC35F3Q8IY50 421 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 PRSS58Q8IYP2 241 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 D2HGDHQ8N465 521 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 DUSP18Q8NEJ0 188 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 TRMT10AQ8TBZ6 339 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 KTI12Q96EK9 354 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 PDCD1LG2Q9BQ51 273 aa16.88■□□□□ 0.29
PRPF40B-208ENST00000548436 TRAV1-2A0A0B4J238 106 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 HTR3EA5X5Y0 456 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 PRR32B1ATL7 298 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 IDSB3KWA1 339 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 NUDT21O43809 227 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 LANCL1O43813 399 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 SERPINA3P01011 423 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 F13BP05160 661 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 CD14P08571 375 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 EDNRAP25101 427 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 TACR3P29371 465 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 GRPRP30550 384 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 CTXN1P60606 82 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 ZNF117Q03924 483 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 IL10RAQ13651 578 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 EBPQ15125 230 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 SF3A2Q15428 464 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 ALG10Q5BKT4 473 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 MZT2BQ6NZ67 158 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 RPL22L1Q6P5R6 122 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 PLET1Q6UQ28 207 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 PLXDC1Q8IUK5 500 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 SLC25A45Q8N413 288 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 EXD3Q8N9H8 876 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 ZNF563Q8TA94 476 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 LPAR4Q99677 370 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 ALG12Q9BV10 488 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 LAT2Q9GZY6 243 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 ZNF304Q9HCX3 659 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 NUFIP1Q9UHK0 495 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 A0A1B0GVT2 93 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 PSMD9O00233 223 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 FBLP22087 321 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 UQCRC1P31930 480 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 STARD6P59095 220 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 NSDHLQ15738 373 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 CEP78Q5JTW2 689 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 C1orf189Q5VU69 101 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 ZNF511Q8NB15 262 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 LSM14AQ8ND56 463 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 OR5H6Q8NGV6 325 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 OR14A2Q96R54 314 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 WACQ9BTA9 647 aa16.87■□□□□ 0.29
PRPF40B-208ENST00000548436 ADAM19Q9H013 955 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms