RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 C1orf146Q5VVC0 180 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ULK3Q6PHR2 472 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 Q6ZPB1 254 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ESPNLQ6ZVH7 1005 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 CCDC103Q8IW40 242 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 OR5M9Q8NGP3 310 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ADAMTS16Q8TE57 1224 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 DNAJA4Q8WW22 397 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 POP5Q969H6 163 aaKnown RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 SLC47A1Q96FL8 570 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 WDYHV1Q96HA8 205 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ADGRG7Q96K78 797 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TIMP4Q99727 224 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 OR11A1Q9GZK7 315 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 POLR2J2Q9GZM3 115 aaKnown RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 POLR2J3Q9H1A7 115 aaKnown RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TP63Q9H3D4 680 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ZCCHC4Q9H5U6 513 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 COQ10BQ9H8M1 238 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 C12orf10Q9HB07 376 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM27Q9HBJ8 222 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 SERINC1Q9NRX5 453 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 PNPLA3Q9NST1 481 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 SELENONQ9NZV5 590 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 SH3BGRL2Q9UJC5 107 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 OSGIN1Q9UJX0 560 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 PRDM4Q9UKN5 801 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 CAMK2AQ9UQM7 478 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF835Q9Y2P0 537 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 TMED7Q9Y3B3 224 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF337Q9Y3M9 751 aa5.68□□□□□ -1.5
PRKDC-211ENST00000546304 FREM1Q5H8C1 2179 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 IGKV1D-42A0A075B6H8 117 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 TRGV8A0A0C4DH27 118 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM72A0PK05 275 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ERICH4A6NGS2 130 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 AQP12BA6NM10 295 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CLCA1A8K7I4 914 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 hCG_2039718K7EN88 272 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 TNFSF11O14788 317 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ADAMDEC1O15204 470 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF208O43345 1280 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 WDR1O75083 606 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 PRSS23O95084 383 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 MT-ND1P03886 318 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 OPN1LWP04000 364 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 THY1P04216 161 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 FABP3P05413 133 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 GPIP06744 558 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 STSP08842 583 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 TFPIP10646 304 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 THRBP10828 461 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 PLA2G2AP14555 144 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 GABRA1P14867 456 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CPN1P15169 458 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CCNA2P20248 432 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 HOXA5P20719 270 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 PTNP21246 168 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CXCR1P25024 350 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ACVR2AP27037 513 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 PTGER4P35408 488 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CA7P43166 264 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 MAGEA2P43356 314 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 LIMS1P48059 325 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ERFP50548 548 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 MAP2K6P52564 334 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CDH12P55289 794 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 RPS3AP61247 264 aaKnown RBP5.67□□□□□ -1.5
PRKDC-211ENST00000546304 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
PRKDC-211ENST00000546304 SRYQ05066 204 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 MYBPHQ13203 477 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 PIN1Q13526 163 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF239Q16600 458 aaKnown RBP5.67□□□□□ -1.5
PRKDC-211ENST00000546304 FAM98BQ52LJ0 330 aaKnown RBP5.67□□□□□ -1.5
PRKDC-211ENST00000546304 EMC4Q5J8M3 183 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 C1orf185Q5T7R7 199 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 C1QL3Q5VWW1 255 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 HBMQ6B0K9 141 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF585AQ6P3V2 769 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 C3P1Q6ZMU1 363 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 WDR88Q6ZMY6 472 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CYP4Z1Q86W10 505 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 SPATA24Q86W54 205 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ADGRG3Q86Y34 549 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 AQP12AQ8IXF9 295 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ADGRG5Q8IZF4 528 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 CELF2-AS1Q8N7Q2 184 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 ATP6V1C2Q8NEY4 427 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 OR10D3Q8NH80 312 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 OR2V1Q8NHB1 315 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 RELTQ969Z4 430 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 DDIT4LQ96D03 193 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 SLC41A3Q96GZ6 507 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 C1orf159Q96HA4 380 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 PYURFQ96I23 114 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 RSRC1Q96IZ7 334 aaKnown RBP5.67□□□□□ -1.5
PRKDC-211ENST00000546304 C7orf34Q96L11 122 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 OR5B2Q96R09 309 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 SEPHS2Q99611 448 aa5.67□□□□□ -1.5
PRKDC-211ENST00000546304 TUBA1CQ9BQE3 449 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms