RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 BAHD1Q8TBE0 780 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 ADAMTS14Q8WXS8 1223 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 UCN3Q969E3 161 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SLAMF7Q9NQ25 335 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ZFP57Q9NU63 452 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 COQ3Q9NZJ6 369 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 LOC105369274A0A096LPK9 316 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 F5H5P2 479 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 H0Y8X5 98 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 OIP5O43482 229 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 SSX4O60224 188 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 NID1P14543 1247 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 APEX1P27695 318 aaKnown RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 TPMTP51580 245 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 HNRNPKP61978 463 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS50-220ENST00000544910 ARFRP1Q13795 201 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 DEFB133Q30KQ1 61 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 OR4N4Q8N0Y3 316 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 C12orf45Q8N5I9 185 aaPredicted RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 OR13H1Q8NG92 308 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ZNF417Q8TAU3 575 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 RSC1A1Q92681 617 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 MRPL38Q96DV4 380 aaKnown RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 LRFN5Q96NI6 719 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 NEURL2Q9BR09 285 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 PLA2G2FQ9BZM2 168 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 SLC38A1Q9H2H9 487 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 UBQLN4Q9NRR5 601 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 REV1Q9UBZ9 1251 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 MOKQ9UQ07 419 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 V9GY05 133 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 FGF17O60258 216 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 FMO6PO60774 539 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 CYB5AP00167 134 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 SOX18P35713 384 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 SIRPAP78324 504 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 FLI1Q01543 452 aaPredicted RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 EEF1A2Q05639 463 aaKnown RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 CLVS2Q5SYC1 327 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 RNLSQ5VYX0 342 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 CHRDL2Q6WN34 429 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 TMEM184AQ6ZMB5 413 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 OR4K17Q8NGC6 315 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 OR1J4Q8NGS1 313 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 HHIPQ96QV1 700 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 INTS14Q96SY0 518 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ATP13A2Q9NQ11 1180 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 MEPEQ9NQ76 525 aaPredicted RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 PPP4R1LQ9P1A2 415 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 EXOGQ9Y2C4 368 aaKnown RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 YARS2Q9Y2Z4 477 aaKnown RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 CASP8AP2Q9UKL3 1982 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 OR5K3A6NET4 321 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ATP6V1G2-DDX39BF2Z307 99 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 DSCR3O14972 297 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 FCMRO60667 390 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 KCNK2O95069 426 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 CSF1P09603 554 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 HLA-DMAP28067 261 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 RBMXP38159 391 aaKnown RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 DHPSP49366 369 aaPredicted RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 NR0B1P51843 470 aaKnown RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 RUNX2Q13950 521 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 CRMP1Q14194 572 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 NSDHLQ15738 373 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 TMEM31Q5JXX7 168 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 RAB11FIP2Q7L804 512 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 SFTPA1Q8IWL2 248 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 IL17RCQ8NAC3 791 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 GHSRQ92847 366 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 MSLNLQ96KJ4 702 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ZNF649Q9BS31 505 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 TMEM43Q9BTV4 400 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 KATNB1Q9BVA0 655 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 SRRQ9GZT4 340 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ZNF304Q9HCX3 659 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 HINT3Q9NQE9 182 aaKnown RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 CMC2Q9NRP2 79 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 FFAR1O14842 300 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 GALR3O60755 368 aaPredicted RBP5.34□□□□□ -1.55
VPS50-220ENST00000544910 SDC3O75056 442 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 SOD1P00441 154 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 CSF3P09919 207 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 NR2C1P13056 603 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ELK1P19419 428 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 MAOAP21397 527 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 HMGN3Q15651 99 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 FRMPD3Q5JV73 1810 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ARTNQ5T4W7 220 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ELP2Q6IA86 826 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 KCTD20Q7Z5Y7 419 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 DNAJC5GQ8N7S2 189 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 OR4M1Q8NGD0 313 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 OR5T3Q8NGG3 340 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 ANGPTL6Q8NI99 470 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 RSPRY1Q96DX4 576 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 FAM86C1Q9NVL1 165 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 CBY1Q9Y3M2 126 aa5.34□□□□□ -1.55
VPS50-220ENST00000544910 A0A1W2PPV9 198 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 A6NIN4 97 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms