RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 SF3A3Q12874 501 aaKnown RBP eCLIP13.76□□□□□ -0.21
LDHB-210ENST00000544151 GABRA6Q16445 453 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 OR7E24Q6IFN5 339 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 PTOV1Q86YD1 416 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 LSMEM1Q8N8F7 131 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 ZIC4Q8N9L1 334 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 SMYD1Q8NB12 490 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 MFSD8Q8NHS3 518 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 RNF217Q8TC41 542 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 C18orf12Q96KH6 178 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 ALKBH3Q96Q83 286 aaPredicted RBP13.76□□□□□ -0.21
LDHB-210ENST00000544151 TRIM2Q9C040 744 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 SLCO5A1Q9H2Y9 848 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 GSX1Q9H4S2 264 aaPredicted RBP13.76□□□□□ -0.21
LDHB-210ENST00000544151 C12orf10Q9HB07 376 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 FGFR1OP2Q9NVK5 253 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 SELENONQ9NZV5 590 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 SEC14L4Q9UDX3 406 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 SLC25A15Q9Y619 301 aa13.76□□□□□ -0.21
LDHB-210ENST00000544151 PLCE1Q9P212 2302 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 SOD3P08294 240 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 PTNP21246 168 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 SELENOPP49908 381 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 ZNF83P51522 516 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 DMTNQ08495 405 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 SPOCK1Q08629 439 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 FAM69AQ5T7M9 428 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 METTL21CQ5VZV1 264 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 TMEM108Q6UXF1 575 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 RANBP3LQ86VV4 465 aaPredicted RBP13.75□□□□□ -0.21
LDHB-210ENST00000544151 C1orf162Q8NEQ5 155 aaPredicted RBP13.75□□□□□ -0.21
LDHB-210ENST00000544151 BHLHE22Q8NFJ8 381 aaPredicted RBP13.75□□□□□ -0.21
LDHB-210ENST00000544151 TSPEARQ8WU66 669 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 DNAJA4Q8WW22 397 aaPredicted RBP13.75□□□□□ -0.21
LDHB-210ENST00000544151 SLC38A4Q969I6 547 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 PRR14Q9BWN1 585 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 AMBRA1Q9C0C7 1298 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 ZNF446Q9NWS9 450 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 RASD1Q9Y272 281 aa13.75□□□□□ -0.21
LDHB-210ENST00000544151 MAGED1Q9Y5V3 778 aaPredicted RBP13.75□□□□□ -0.21
LDHB-210ENST00000544151 IGKV1D-42A0A075B6H8 117 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 SHISA9B4DS77 424 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 M0R1B8 84 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 M0R3H8 397 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 TMCC2O75069 709 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 KRT33AO76009 404 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 MFN2O95140 757 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 INHBBP09529 407 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 CDH2P19022 906 aaPredicted RBP13.74□□□□□ -0.21
LDHB-210ENST00000544151 MPGP29372 298 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 ATP5J2P56134 94 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 PCBP3P57721 371 aaKnown RBP13.74□□□□□ -0.21
LDHB-210ENST00000544151 SLC25A3Q00325 362 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 TGFBR3Q03167 851 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 RBBP4Q09028 425 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 TRMT5Q32P41 509 aaKnown RBP13.74□□□□□ -0.21
LDHB-210ENST00000544151 FAM91A1Q658Y4 838 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 CGB2Q6NT52 195 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 NIPAL3Q6P499 406 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 ULK3Q6PHR2 472 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 KLHL17Q6TDP4 642 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 C5orf46Q6UWT4 87 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 PRSS57Q6UWY2 283 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 CREB3L2Q70SY1 520 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 ABHD12BQ7Z5M8 362 aaPredicted RBP13.74□□□□□ -0.21
LDHB-210ENST00000544151 C17orf78Q8N4C9 275 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 POMGNT2Q8NAT1 580 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 SMAP2Q8WU79 429 aaPredicted RBP13.74□□□□□ -0.21
LDHB-210ENST00000544151 SLC47A1Q96FL8 570 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 MUS81Q96NY9 551 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 SMR3AQ99954 134 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 WFDC6Q9BQY6 131 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 ALG2Q9H553 416 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 PIF1Q9H611 641 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 KAT8Q9H7Z6 458 aaKnown RBP13.74□□□□□ -0.21
LDHB-210ENST00000544151 TMEM27Q9HBJ8 222 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 POU2F3Q9UKI9 436 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 AMDHD2Q9Y303 409 aa13.74□□□□□ -0.21
LDHB-210ENST00000544151 TRAV36DV7A0A075B6V5 113 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 A0A0B4J2E0 115 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 A0A1B0GX12 115 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 TRIM64A6NGJ6 449 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 TRIM64BA6NI03 449 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 ZNF587BE7ETH6 402 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 H7C1Q1 480 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 M0R082 166 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 AIM2O14862 343 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 OR2T1O43869 369 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
LDHB-210ENST00000544151 DANCRP0C864 163 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 PAX1P15863 534 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 ZNF43P17038 809 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 CBLP22681 906 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 GRPRP30550 384 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 CDKN1AP38936 164 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 ARFIP2P53365 341 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 IL1RL1Q01638 556 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 LGALS3BPQ08380 585 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 OR1Q1Q15612 314 aa13.73□□□□□ -0.21
LDHB-210ENST00000544151 REP15Q6BDI9 236 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms