RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 COMTD1Q86VU5 262 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 SLC16A7O60669 478 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 F11P03951 625 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 VASPP50552 380 aaPredicted RBP17.96■□□□□ 0.47
SUDS3-204ENST00000543473 ZNF385BQ569K4 471 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 OR52R1Q8NGF1 315 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 ARL5BQ96KC2 179 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 FAM71F1Q96KD3 344 aaPredicted RBP17.96■□□□□ 0.47
SUDS3-204ENST00000543473 C8orf33Q9H7E9 229 aaPredicted RBP17.96■□□□□ 0.47
SUDS3-204ENST00000543473 B3GAT2Q9NPZ5 323 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 SLC6A13Q9NSD5 602 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 GABARAPH6UMI1 98 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 MAN2B1O00754 1011 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 SRMP19623 302 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 FXYD4P59646 89 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 CDK3Q00526 305 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 OR2A12Q8NGT7 310 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 THAP3Q8WTV1 239 aaPredicted RBP17.96■□□□□ 0.47
SUDS3-204ENST00000543473 MCOLN1Q9GZU1 580 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 ZBP1Q9H171 429 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 SIRT5Q9NXA8 310 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 TAAR2Q9P1P5 351 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 ZNF225Q9UK10 706 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 ATG4BQ9Y4P1 393 aa17.96■□□□□ 0.47
SUDS3-204ENST00000543473 SLC22A23A1A5C7 686 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 PAPLNO95428 1278 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 SLC34A2O95436 690 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 SLC9A3R2Q15599 337 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 SUMF2Q8NBJ7 301 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 LMF2Q9BU23 707 aaKnown RBP17.95■□□□□ 0.46
SUDS3-204ENST00000543473 HTR3BO95264 441 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 CLDN6P56747 220 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 TNK1Q13470 666 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 RTL10Q7L3V2 364 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 NKAIN4Q8IVV8 208 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 TMEM156Q8N614 296 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 OR52I2Q8NH67 350 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 BMFQ96LC9 184 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 PDCD1LG2Q9BQ51 273 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 PRKRAO75569 313 aaKnown RBP17.95■□□□□ 0.46
SUDS3-204ENST00000543473 LGI1O95970 557 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 DEFA6Q01524 100 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 GBX1Q14549 363 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 OR5K2Q8NHB8 316 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 NMNAT3Q96T66 252 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 TPSD1Q9BZJ3 242 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 HINT3Q9NQE9 182 aaKnown RBP17.95■□□□□ 0.46
SUDS3-204ENST00000543473 VSTM2BA6NLU5 285 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 E9PI62 339 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 F13BP05160 661 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 PER3P56645 1201 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 TEX261Q6UWH6 196 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 DVL3Q92997 716 aaPredicted RBP17.95■□□□□ 0.46
SUDS3-204ENST00000543473 TEAD3Q99594 435 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 MED18Q9BUE0 208 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 CCL26Q9Y258 94 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 RHBDD3Q9Y3P4 386 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 ETV7Q9Y603 341 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 U3KQ87 197 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 SHANK3Q9BYB0 1731 aa17.95■□□□□ 0.46
SUDS3-204ENST00000543473 SERPINA5P05154 406 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 FLI1Q01543 452 aaPredicted RBP17.94■□□□□ 0.46
SUDS3-204ENST00000543473 NPRL2Q8WTW4 380 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 FOXN4Q96NZ1 517 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 SPNS1Q9H2V7 528 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 LUZP4Q9P127 313 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 GFYI3L273 518 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 PLPP1O14494 284 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 RDH16O75452 317 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 SBK2P0C263 348 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 SLC14A1Q13336 389 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 STK11Q15831 433 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 OR51D1Q8NGF3 324 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 OR5D14Q8NGL3 314 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 OR10R2Q8NGX6 335 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 NKX6-2Q9C056 277 aaPredicted RBP17.94■□□□□ 0.46
SUDS3-204ENST00000543473 PIGMQ9H3S5 423 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 PDE7BQ9NP56 450 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 TMEM212A6NML5 194 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 AGAP14A8MT82 685 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 D6RAR5 112 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 ABLIM3O94929 683 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 WDPCPO95876 746 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 ADRB1P08588 477 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 CHATP28329 748 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 RAB5CP51148 216 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 PDFQ9HBH1 243 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 A0A1W2PS29 197 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 TSTD3H0UI37 97 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 PMS2P2O95744 297 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 GPR75O95800 540 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 EMP2P54851 167 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 RSU1Q15404 277 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 LTB4RQ15722 352 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 AANATQ16613 207 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 GPR139Q6DWJ6 353 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 RSPO2Q6UXX9 243 aaPredicted RBP17.94■□□□□ 0.46
SUDS3-204ENST00000543473 NLRC3Q7RTR2 1065 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 TMEM200AQ86VY9 491 aa17.94■□□□□ 0.46
SUDS3-204ENST00000543473 EVA1AQ9H8M9 152 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms