RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 BBIP1A8MTZ0 92 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CLIC1O00299 241 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 PEX1O43933 1283 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 DCTN3O75935 186 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 KCNK2O95069 426 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 BCL10O95999 233 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 OR12D1P0DN82 309 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CCL3P10147 92 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 ADRA2CP18825 462 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 ATP6V1C1P21283 382 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CNR1P21554 472 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 ACHEP22303 614 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 PPIBP23284 216 aaKnown RBP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 MAP3K8P41279 467 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CRATP43155 626 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 LIMS1P48059 325 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CLK3P49761 638 aaKnown RBP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 F2RL1P55085 397 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 MXRA7P84157 204 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 DUSP5Q16690 384 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CR1LQ2VPA4 569 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 GTDC1Q4AE62 458 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 DCST2Q5T1A1 773 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 LRIF1Q5T3J3 769 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 TNFAIP8L2Q6P589 184 aaPredicted RBP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 B3GNT6Q6ZMB0 384 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 C16orf62Q7Z3J2 963 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 MDGA2Q7Z553 956 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 MTERF4Q7Z6M4 381 aaKnown RBP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 DHDDSQ86SQ9 333 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF679Q8IYX0 411 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF843Q8N446 348 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CCDC197Q8NCU1 140 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 OR5D16Q8NGK9 328 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 RP9Q8TA86 221 aaKnown RBP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 PNPT1Q8TCS8 783 aaKnown RBP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 SPPL2AQ8TCT8 520 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 MIPOL1Q8TD10 442 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 PAQR8Q8TEZ7 354 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 ZFP90Q8TF47 636 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 XAGE5Q8WWM1 108 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CMTM5Q96DZ9 223 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 SCMH1Q96GD3 660 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 LRRC37BQ96QE4 947 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 SECISBP2Q96T21 854 aaKnown RBP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 HES7Q9BYE0 225 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 METTL7AQ9H8H3 244 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 TPT1P8Q9HAU6 139 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 IL1RL2Q9HB29 575 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 SLC6A13Q9NSD5 602 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 RLIMQ9NVW2 624 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 KLRF1Q9NZS2 232 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 CHCHD2Q9Y6H1 151 aaPredicted RBP4.63□□□□□ -1.67
CLIP1-217ENST00000543205 KCNE3Q9Y6H6 103 aa4.63□□□□□ -1.67
CLIP1-217ENST00000543205 TMEM247A6NEH6 219 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 EVPLLA8MZ36 301 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 G3V3Y1 287 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 FBP2O00757 339 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 NDUFAB1O14561 156 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 MRASO14807 208 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 RGS10O43665 173 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 TSPAN2O60636 221 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 UGT2B11O75310 529 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 SORBS2O94875 1100 aaKnown RBP4.62□□□□□ -1.67
CLIP1-217ENST00000543205 CRYABP02511 175 aaKnown RBP4.62□□□□□ -1.67
CLIP1-217ENST00000543205 RAP2AP10114 183 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 COX4I1P13073 169 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 CYP4B1P13584 511 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 MMP9P14780 707 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 HPGDP15428 266 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 FUT1P19526 365 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 EDN2P20800 178 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 PTPN6P29350 595 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 LCN1P31025 176 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 MAGEA8P43361 318 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 MEOX1P50221 254 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 SNU13P55769 128 aaKnown RBP4.62□□□□□ -1.67
CLIP1-217ENST00000543205 CARD18P57730 90 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 KCNJ2P63252 427 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 HPCAP84074 193 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 PLGLB1Q02325 96 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 COQ5Q5HYK3 327 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 CCNJQ5T5M9 372 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 PRAMEF20Q5VT98 475 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 REP15Q6BDI9 236 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 GLDNQ6ZMI3 551 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-217ENST00000543205 CFAP77Q6ZQR2 320 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 RRM2BQ7LG56 351 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 GALNT10Q86SR1 603 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 PHC2Q8IXK0 858 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 OR52N2Q8NGI0 321 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 FAM110BQ8TC76 370 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 CNOT9Q92600 299 aaKnown RBP4.62□□□□□ -1.67
CLIP1-217ENST00000543205 SGCDQ92629 289 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 RAB8BQ92930 207 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 HGDQ93099 445 aa4.62□□□□□ -1.67
CLIP1-217ENST00000543205 AURKBQ96GD4 344 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-217ENST00000543205 JSRP1Q96MG2 331 aaPredicted RBP4.62□□□□□ -1.67
CLIP1-217ENST00000543205 NODALQ96S42 347 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms