RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PTGES2Q9H7Z7 377 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 NANSQ9NR45 359 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 DNAJC27Q9NZQ0 273 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 TRAV36DV7A0A075B6V5 113 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 ATXN7O15265 892 aaPredicted RBP25.06■■□□□ 1.6
CCM2-218ENST00000541586 NPIPB7O75200 414 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 HMGN1P05114 100 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 PLGLB1Q02325 96 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 SLC25A53Q5H9E4 307 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 SLC25A30Q5SVS4 291 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 C1QL3Q5VWW1 255 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 BCDIN3DQ7Z5W3 292 aaKnown RBP25.06■■□□□ 1.6
CCM2-218ENST00000541586 LNX2Q8N448 690 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 Q96MT0 163 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 GNRHR2Q96P88 292 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 PSORS1C1Q9UIG5 152 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 GPR52Q9Y2T5 361 aa25.06■■□□□ 1.6
CCM2-218ENST00000541586 SHISA8B8ZZ34 492 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 SNPHO15079 494 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 SLC6A6P31641 620 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 RPS4XP62701 263 aaKnown RBP25.05■■□□□ 1.6
CCM2-218ENST00000541586 OCLNQ16625 522 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 GXYLT1Q4G148 440 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 SLC43A2Q8N370 569 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 OR1J4Q8NGS1 313 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 STK35Q8TDR2 534 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 IPCEF1Q8WWN9 437 aaPredicted RBP25.05■■□□□ 1.6
CCM2-218ENST00000541586 LRR1Q96L50 414 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 MRGPRX4Q96LA9 322 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 PTDSS2Q9BVG9 487 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 ERVK-18Q9QC07 812 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 CHRNA9Q9UGM1 479 aa25.05■■□□□ 1.6
CCM2-218ENST00000541586 NDUFB2O95178 105 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 ASAH2BP0C7U1 165 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 GRK5P34947 590 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 AHSA2Q719I0 299 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 SPARTQ8N0X7 666 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 Q8NA96 180 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 POC1BQ8TC44 478 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 GGHQ92820 318 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 OR11A1Q9GZK7 315 aa25.04■■□□□ 1.6
CCM2-218ENST00000541586 BOKQ9UMX3 212 aaPredicted RBP25.04■■□□□ 1.6
CCM2-218ENST00000541586 SMG1Q96Q15 3661 aaKnown RBP25.04■■□□□ 1.6
CCM2-218ENST00000541586 TLN1Q9Y490 2541 aaKnown RBP25.04■■□□□ 1.6
CCM2-218ENST00000541586 CLCA1A8K7I4 914 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 TRIM3O75382 744 aaPredicted RBP25.03■■□□□ 1.6
CCM2-218ENST00000541586 SLC2A10O95528 541 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 BGLAPP02818 100 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 SYT14P1Q58G82 188 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 C1orf140Q5VVS0 124 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 KCTD8Q6ZWB6 473 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 DNAJA3Q96EY1 480 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 TMEM41AQ96HV5 264 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 PLEKHA8Q96JA3 519 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 FKRPQ9H9S5 495 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 ZFP64Q9NPA5 681 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 ZNF229Q9UJW7 825 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 FAM47E-STBD1D6RA91 191 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 PPP1R3DO95685 299 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 FOXO1Q12778 655 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 MEDAGQ5VYS4 303 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 SATL1Q86VE3 508 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 TTTY12Q9BZ98 90 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 CCDC90BQ9GZT6 254 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 CCNB1IP1Q9NPC3 277 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 FKBP14Q9NWM8 211 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 HIF3AQ9Y2N7 669 aa25.03■■□□□ 1.6
CCM2-218ENST00000541586 FAM166BA8MTA8 275 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 TCEA1P23193 301 aaKnown RBP25.02■■□□□ 1.6
CCM2-218ENST00000541586 PRPS1P60891 318 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 TOMM20Q15388 145 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 SLC35F1Q5T1Q4 408 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 TIGD3Q6B0B8 471 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 C5orf46Q6UWT4 87 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 IGFN1Q86VF2 1251 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 CISD2Q8N5K1 135 aaKnown RBP25.02■■□□□ 1.6
CCM2-218ENST00000541586 ZNF582Q96NG8 517 aaPredicted RBP25.02■■□□□ 1.6
CCM2-218ENST00000541586 TAAR6Q96RI8 345 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 COPS4Q9BT78 406 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 BAIAP2Q9UQB8 552 aa25.02■■□□□ 1.6
CCM2-218ENST00000541586 MCIDASD6RGH6 385 aa25.01■■□□□ 1.59
CCM2-218ENST00000541586 BLOC1S5-TXNDC5H3BN57 136 aa25.01■■□□□ 1.59
CCM2-218ENST00000541586 RGS10O43665 173 aa25.01■■□□□ 1.59
CCM2-218ENST00000541586 RFPL3SP0C7P2 107 aa25.01■■□□□ 1.59
CCM2-218ENST00000541586 ALDH3B2P48448 385 aa25.01■■□□□ 1.59
CCM2-218ENST00000541586 FAM69AQ5T7M9 428 aa25.01■■□□□ 1.59
CCM2-218ENST00000541586 RPUSD3Q6P087 351 aaKnown RBP25.01■■□□□ 1.59
CCM2-218ENST00000541586 MOSPD2Q8NHP6 518 aa25.01■■□□□ 1.59
CCM2-218ENST00000541586 BBC3Q96PG8 261 aaPredicted RBP25.01■■□□□ 1.59
CCM2-218ENST00000541586 SNX5Q9Y5X3 404 aa25.01■■□□□ 1.59
CCM2-218ENST00000541586 ZNF208O43345 1280 aa25■■□□□ 1.59
CCM2-218ENST00000541586 EFNA2O43921 213 aa25■■□□□ 1.59
CCM2-218ENST00000541586 IL11P20809 199 aa25■■□□□ 1.59
CCM2-218ENST00000541586 AQP2P41181 271 aa25■■□□□ 1.59
CCM2-218ENST00000541586 FOXK1P85037 733 aa25■■□□□ 1.59
CCM2-218ENST00000541586 ZFP62Q8NB50 900 aaPredicted RBP25■■□□□ 1.59
CCM2-218ENST00000541586 RELTQ969Z4 430 aa25■■□□□ 1.59
CCM2-218ENST00000541586 SIGLEC11Q96RL6 698 aa25■■□□□ 1.59
CCM2-218ENST00000541586 A0A087WZY1 265 aa25■■□□□ 1.59
CCM2-218ENST00000541586 LRRC3CA6NJW4 275 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms