RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MICAQ29983 383 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 KLHL38Q2WGJ6 581 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 TRIM16LQ309B1 348 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 TP53I3Q53FA7 332 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 AP1ARQ63HQ0 302 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 ATL3Q6DD88 541 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF497Q6ZNH5 498 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 ECHDC2Q86YB7 292 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SUMF1Q8NBK3 374 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 MFSD9Q8NBP5 474 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 FAM83FQ8NEG4 500 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SPATA4Q8NEY3 305 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 OR2T33Q8NG76 320 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 OR5L2Q8NGL0 311 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 ZNF671Q8TAW3 534 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 FAM81AQ8TBF8 368 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 FNDC8Q8TC99 324 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SLC22A8Q8TCC7 542 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 AGR3Q8TD06 166 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SCFD1Q8WVM8 642 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 GIMAP1Q8WWP7 306 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 MCUR1Q96AQ8 359 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 EFHD2Q96C19 240 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-217ENST00000541578 MCRIP2Q9BUT9 160 aaKnown RBP3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SLITRK2Q9H156 845 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 GLT8D2Q9H1C3 349 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 PORCNQ9H237 461 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 AZI2Q9H6S1 392 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 ONECUT1Q9UBC0 465 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 PRODH2Q9UF12 536 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 SLC2A6Q9UGQ3 507 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 MLXQ9UH92 298 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 IKZF2Q9UKS7 526 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 MEMO1Q9Y316 297 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 TRIOO75962 3097 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 CDH23Q9H251 3354 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 GAKO14976 1311 aa3.41□□□□□ -1.86
SNHG1-217ENST00000541578 MYH1P12882 1939 aa3.4□□□□□ -1.86
SNHG1-217ENST00000541578 XIRP2A4UGR9 3374 aa3.4□□□□□ -1.86
SNHG1-217ENST00000541578 IGHV3OR16-12A0A075B7B8 117 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 SAGE2PA6NJ88 616 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 ACOD1A6NK06 481 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 EFCAB7A8K855 629 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 TMEM110-MUSTN1A8MSY1 372 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF487B1APH4 448 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 E7ESA3 106 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 K7EQG2 157 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 WRBO00258 174 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 RGS16O15492 202 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF264O43296 627 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 RNF13O43567 381 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 E2F6O75461 281 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 ATP5LO75964 103 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 AP2A1O95782 977 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 MCF2P10911 925 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 CHMLP26374 656 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 GNA11P29992 359 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 CASP14P31944 242 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 CDH5P33151 784 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 CASP4P49662 377 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 TPMTP51580 245 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 ARHGDIBP52566 201 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 RPL8P62917 257 aaKnown RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 SLC5A12Q1EHB4 618 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 C2CD6Q53TS8 623 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 SFT2D3Q587I9 215 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 LINC00242Q5T6M2 205 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 MYPOPQ86VE0 399 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 TFB1MQ8WVM0 346 aaKnown RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 TCTEX1D2Q8WW35 142 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 CXorf40BQ96DE9 158 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 TIMD4Q96H15 378 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 MS4A14Q96JA4 679 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 SERAC1Q96JX3 654 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 C12orf42Q96LP6 360 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 PRICKLE1Q96MT3 831 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 SLC38A2Q96QD8 506 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 SH3GL3Q99963 347 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 CENPKQ9BS16 269 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 PARD6BQ9BYG5 372 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 TUBB1Q9H4B7 451 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF385DQ9H6B1 395 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 NHEJ1Q9H9Q4 299 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 FAM120CQ9NX05 1096 aaKnown RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 KLHL28Q9NXS3 571 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 EHFQ9NZC4 300 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 THAP10Q9P2Z0 257 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 RSPH14Q9UHP6 348 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 TBX21Q9UL17 535 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 TMCO1Q9UM00 188 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 SPATA2Q9UM82 520 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 PRPF19Q9UMS4 504 aaKnown RBP3.4□□□□□ -1.87
SNHG1-217ENST00000541578 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 MMP24Q9Y5R2 645 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 MYO10Q9HD67 2058 aa3.4□□□□□ -1.87
SNHG1-217ENST00000541578 CHD7Q9P2D1 2997 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 USP34Q70CQ2 3546 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 MYH8P13535 1937 aa3.39□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF318Q5VUA4 2279 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms