RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 REG4Q9BYZ8 158 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 CHST6Q9GZX3 395 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR5V1Q9UGF6 321 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3EA0A087X179 549 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3KA0A087X1G2 549 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3FA6NER0 549 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 DCTN6O00399 190 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 KDM4BO94953 1096 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 LIPCP11150 499 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 CCL5P13501 91 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 P2RX1P51575 399 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 GBX2P52951 348 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 TBC1D3GQ6DHY5 549 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR7E24Q6IFN5 339 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 C3P1Q6ZMU1 363 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 RNF44Q7L0R7 432 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 GLB1L2Q8IW92 636 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 WFIKKN2Q8TEU8 576 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 FBXW5Q969U6 566 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 CNN2Q99439 309 aaKnown RBP9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 NRIP3Q9NQ35 241 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 DAPP1Q9UN19 280 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 NPFFR2Q9Y5X5 522 aa9.5□□□□□ -0.89
CDC42SE1-207ENST00000540998 TRAV8-7A0A075B6U6 113 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 hCG_1807616A0A1W2PRN6 198 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 TMEM72A0PK05 275 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 IFITM5A6NNB3 132 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 SPDEFO95238 335 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF35P13682 527 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 GALP22466 123 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 DPP4P27487 766 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 CEBPEQ15744 281 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 UBE2NLQ5JXB2 153 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 TMPRSS11FQ6ZWK6 438 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 FGD2Q7Z6J4 655 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 ST8SIA4Q92187 359 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 DIABLOQ9NR28 239 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 ANXA2P2A6NMY6 339 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 BLOC1S5-TXNDC5H3BN57 136 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 LSSP48449 732 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PPP2CBP62714 309 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PPP2CAP67775 309 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 GPAT4Q86UL3 456 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PAQR7Q86WK9 346 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR52R1Q8NGF1 315 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 ATOH1Q92858 354 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PPP1R14AQ96A00 147 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 ARL6Q9H0F7 186 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 KRCC1Q9NPI7 259 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 CELSR3Q9NYQ7 3312 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 TEX51A0A1B0GUA7 166 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PLSCR5A0PG75 271 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC22A23A1A5C7 686 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 SUSD5O60279 629 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PPM1BO75688 479 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 KRT33AO76009 404 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 F13BP05160 661 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 DBIP07108 87 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 NMBP08949 121 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 DDX6P26196 483 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 ITPKBP27987 946 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PITPNAQ00169 270 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 STX4Q12846 297 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 CBFBQ13951 182 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 EIPR1Q53HC9 387 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PRRT3Q5FWE3 981 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 NHLRC3Q5JS37 347 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 FHL5Q5TD97 284 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC22A10Q63ZE4 541 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 B3GNTL1Q67FW5 361 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PWWP2BQ6NUJ5 590 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 SEZ6L2Q6UXD5 910 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 LRRC69Q6ZNQ3 347 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 NDUFAF7Q7L592 441 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 BIVMQ86UB2 503 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC51BQ86UW2 128 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 ST8SIA2Q92186 375 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 ELF4Q99607 663 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 TMEM27Q9HBJ8 222 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 SRA1Q9HD15 236 aaKnown RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PRDM9Q9NQV7 894 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 NPDC1Q9NQX5 325 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 PHPT1Q9NRX4 125 aaPredicted RBP9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 TAS2R10Q9NYW0 307 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 GPR160Q9UJ42 338 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 FOXJ3Q9UPW0 622 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 STON1Q9Y6Q2 735 aa9.49□□□□□ -0.89
CDC42SE1-207ENST00000540998 MED12Q93074 2177 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 A0A0B4J2E0 115 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 A0A1B0GX12 115 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 OGG1O15527 345 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 KCNAB3O43448 404 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC35G6P0C7Q6 338 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 TAGLNQ01995 201 aaKnown RBP9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 SGCGQ13326 291 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 GRM7Q14831 915 aa9.48□□□□□ -0.89
CDC42SE1-207ENST00000540998 ZNF542PQ5EBM4 170 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms