RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 PCDHB8Q9UN66 801 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 TMEM184BQ9Y519 407 aaPredicted RBP8.97□□□□□ -0.97
CLDN2-202ENST00000540876 CCDC88CQ9P219 2028 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 FAM86C2PA6NEL3 165 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 RNASEK-C17orf49H0YIS7 233 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 H1F0P07305 194 aaKnown RBP8.97□□□□□ -0.97
CLDN2-202ENST00000540876 NME2P22392 152 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 MAT2AP31153 395 aaKnown RBP8.97□□□□□ -0.97
CLDN2-202ENST00000540876 OPRD1P41143 372 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 TBX4P57082 545 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 CSRP2Q16527 193 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 TMEM31Q5JXX7 168 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 CLEC12AQ5QGZ9 265 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 C10orf120Q5SQS8 335 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 ARMC12Q5T9G4 340 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 PLPP4Q5VZY2 271 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 ZDHHC20Q5W0Z9 365 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 PPP1R3BQ86XI6 285 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 CMTM4Q8IZR5 234 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 CFAP52Q8N1V2 620 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 BRIX1Q8TDN6 353 aaKnown RBP8.97□□□□□ -0.97
CLDN2-202ENST00000540876 TMED6Q8WW62 240 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 ROBO4Q8WZ75 1007 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 CMTM7Q96FZ5 175 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 AKR1E2Q96JD6 320 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 IP6K3Q96PC2 410 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 TMEM121BQ9BXQ6 578 aaPredicted RBP8.97□□□□□ -0.97
CLDN2-202ENST00000540876 TWSG1Q9GZX9 223 aa8.97□□□□□ -0.97
CLDN2-202ENST00000540876 MTIF3Q9H2K0 278 aaKnown RBP8.97□□□□□ -0.97
CLDN2-202ENST00000540876 FAAHO00519 579 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 SMAD6O43541 496 aaKnown RBP8.96□□□□□ -0.97
CLDN2-202ENST00000540876 CRTAPO75718 401 aaPredicted RBP8.96□□□□□ -0.97
CLDN2-202ENST00000540876 OR2F2O95006 317 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 RPS10P46783 165 aaKnown RBP8.96□□□□□ -0.97
CLDN2-202ENST00000540876 GSK3AP49840 483 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 EPHB3P54753 998 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 LSM11P83369 360 aaKnown RBP eCLIP8.96□□□□□ -0.97
CLDN2-202ENST00000540876 IRF8Q02556 426 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 TDGQ13569 410 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 OR2F1Q13607 317 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 IL10RAQ13651 578 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 SLBPQ14493 270 aaKnown RBP eCLIP8.96□□□□□ -0.97
CLDN2-202ENST00000540876 CPTPQ5TA50 214 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 ABHD13Q7L211 337 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 RBM45Q8IUH3 476 aaKnown RBP8.96□□□□□ -0.97
CLDN2-202ENST00000540876 OR5AK3PQ8NH89 298 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 LGALS14Q8TCE9 139 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 PPCDCQ96CD2 204 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 ELF4Q99607 663 aaPredicted RBP8.96□□□□□ -0.97
CLDN2-202ENST00000540876 SEMA3CQ99985 751 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 EGLN3Q9H6Z9 239 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 ASCL3Q9NQ33 180 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 MAN2C1Q9NTJ4 1040 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 MRPS18AQ9NVS2 196 aaKnown RBP8.96□□□□□ -0.97
CLDN2-202ENST00000540876 COMMD9Q9P000 198 aa8.96□□□□□ -0.97
CLDN2-202ENST00000540876 C1orf226A1L170 272 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 C7orf77A4D0Y5 90 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 OR5H14A6NHG9 310 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 BCAT2O15382 392 aaPredicted RBP8.96□□□□□ -0.98
CLDN2-202ENST00000540876 FGF16O43320 207 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 KCNAB3O43448 404 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 CLDN11O75508 207 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 AMD1P17707 334 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 CD80P33681 288 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 CD200P41217 278 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 NSG1P42857 185 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 OMPP47874 163 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 TTLL10Q6ZVT0 673 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 SLC36A1Q7Z2H8 476 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 NRROSQ86YC3 692 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 SDR9C7Q8NEX9 313 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 FBXO22Q8NEZ5 403 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 CLP1Q92989 425 aaKnown RBP8.96□□□□□ -0.98
CLDN2-202ENST00000540876 FUBP3Q96I24 572 aaKnown RBP eCLIP8.96□□□□□ -0.98
CLDN2-202ENST00000540876 SMIM14Q96QK8 99 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 SPON2Q9BUD6 331 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 PLA2G12AQ9BZM1 189 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 SMG9Q9H0W8 520 aaKnown RBP8.96□□□□□ -0.98
CLDN2-202ENST00000540876 GPATCH2Q9NW75 528 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 DOK5Q9P104 306 aa8.96□□□□□ -0.98
CLDN2-202ENST00000540876 PDCD11Q14690 1871 aaKnown RBP8.96□□□□□ -0.98
CLDN2-202ENST00000540876 CTDSPLO15194 276 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 GPR39O43194 453 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 VNN2O95498 520 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 THBS1P07996 1170 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 CD79AP11912 226 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 OR1E1P30953 314 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 PMELP40967 661 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 ZNF235Q14590 738 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 SLC9A5Q14940 896 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 AWAT1Q58HT5 328 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 PRRT3Q5FWE3 981 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 RNASE10Q5GAN6 216 aaKnown RBP8.95□□□□□ -0.98
CLDN2-202ENST00000540876 SLC25A30Q5SVS4 291 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 OR2A2Q6IF42 318 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 TRIM40Q6P9F5 258 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 CLEC2AQ6UVW9 174 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 TDHQ8IZJ6 230 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 OR8J2Q8NGG1 315 aa8.95□□□□□ -0.98
CLDN2-202ENST00000540876 OR56B1Q8NGI3 324 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms