RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 AQP7P3A6NL99 342 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 KLF11O14901 512 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 NPHS1O60500 1241 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 PEX11AO75192 247 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 DCTN3O75935 186 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 UBOX5O94941 541 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 LGI1O95970 557 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 C1QCP02747 245 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 TROVE2P10155 538 aaKnown RBP eCLIP6.32□□□□□ -1.4
YBX3-209ENST00000540747 DAOP14920 347 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 NQO1P15559 274 aaKnown RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 PAX7P23759 505 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 APEX1P27695 318 aaKnown RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 RYKP34925 604 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 SLC1A3P43003 542 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 HTR3AP46098 478 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 IDH2P48735 452 aaKnown RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 POLR2HP52434 150 aaKnown RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 MAP2K6P52564 334 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 ARFIP2P53365 341 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 CLDN8P56748 225 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 WDR4P57081 412 aaKnown RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 KCNJ10P78508 379 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 ELF3P78545 371 aaPredicted RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 LGALS3BPQ08380 585 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 TRIP10Q15642 601 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 CARTPTQ16568 116 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 MSMPQ1L6U9 139 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 IQCCQ4KMZ1 466 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 IL23RQ5VWK5 629 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 SAXO2Q658L1 398 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 C12orf54Q6X4T0 127 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 SPATA19Q7Z5L4 167 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 DDIASQ8IXT1 998 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 CMIPQ8IY22 773 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 C4orf33Q8N1A6 199 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 TMEM99Q8N816 258 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 OR4F15Q8NGB8 312 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 NEU4Q8WWR8 484 aaPredicted RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 PMM1Q92871 262 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 ROPN1LQ96C74 230 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 SLC35G5Q96KT7 338 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 RAB3IPQ96QF0 476 aaPredicted RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 VRK1Q99986 396 aaPredicted RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 SLC38A1Q9H2H9 487 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 UPB1Q9UBR1 384 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 FBXO9Q9UK97 447 aaPredicted RBP6.32□□□□□ -1.4
YBX3-209ENST00000540747 WDR45Q9Y484 360 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 SPEF1Q9Y4P9 236 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 USH1CQ9Y6N9 552 aa6.32□□□□□ -1.4
YBX3-209ENST00000540747 IGHV2OR16-5A0A0B4J2B6 119 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 ZNF503-AS2A6NEH8 195 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 AGAP5A6NIR3 686 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 TMEM229AB2RXF0 380 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 RPL36A-HNRNPH2H7BZ11 118 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 hCG_2039718K7EN88 272 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 NR5A2O00482 541 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 COPEO14579 308 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 NPIPB7O75200 414 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 ZNF432O94892 652 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 AGR2O95994 175 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 CRYAAP02489 173 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 CELA3BP08861 270 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 OR12D1P0DN82 309 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 G6PDP11413 515 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 HOXB1P14653 301 aaPredicted RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 TACR3P29371 465 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 THBS4P35443 961 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 SOAT1P35610 550 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 SRP14P37108 136 aaKnown RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 SELENOPP49908 381 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 RASSF2P50749 326 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 EPS8Q12929 822 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 BNIP1Q12981 228 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 MAPK11Q15759 364 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 OTUD3Q5T2D3 398 aaPredicted RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 OR4F3Q6IEY1 312 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 TNFAIP8L2Q6P589 184 aaPredicted RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 KLHL24Q6TFL4 600 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 AAED1Q7RTV5 226 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 C16orf62Q7Z3J2 963 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 HMGN2P46Q86SG4 172 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 EPHX4Q8IUS5 362 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 ZCCHC24Q8N2G6 241 aaKnown RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 SVOPLQ8N434 492 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 ANKK1Q8NFD2 765 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 OR8J2Q8NGG1 315 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 ZNF563Q8TA94 476 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 RAB8BQ92930 207 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 DDIT4LQ96D03 193 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 ZMYND19Q96E35 227 aaPredicted RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 NEURL3Q96EH8 262 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 AURKBQ96GD4 344 aaPredicted RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 ALKBH3Q96Q83 286 aaPredicted RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 SNX18Q96RF0 628 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 PRPF18Q99633 342 aaKnown RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 NAA11Q9BSU3 229 aaPredicted RBP6.31□□□□□ -1.4
YBX3-209ENST00000540747 LINC00470Q9BZP3 86 aa6.31□□□□□ -1.4
YBX3-209ENST00000540747 RAB1BQ9H0U4 201 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 268.4 ms