RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 C9orf135Q5VTT2 229 aa18.4■□□□□ 0.54
CHFR-217ENST00000540537 ABHD12BQ7Z5M8 362 aaPredicted RBP18.4■□□□□ 0.54
CHFR-217ENST00000540537 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
CHFR-217ENST00000540537 LSMEM1Q8N8F7 131 aa18.4■□□□□ 0.54
CHFR-217ENST00000540537 WDR31Q8NA23 367 aa18.4■□□□□ 0.54
CHFR-217ENST00000540537 ELOA3Q8NG57 546 aa18.4■□□□□ 0.54
CHFR-217ENST00000540537 PTDSS2Q9BVG9 487 aa18.4■□□□□ 0.54
CHFR-217ENST00000540537 ALG2Q9H553 416 aa18.4■□□□□ 0.54
CHFR-217ENST00000540537 IKZF5Q9H5V7 419 aa18.4■□□□□ 0.54
CHFR-217ENST00000540537 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.4■□□□□ 0.54
CHFR-217ENST00000540537 HIVEP2P31629 2446 aa18.4■□□□□ 0.54
CHFR-217ENST00000540537 OR6C65A6NJZ3 312 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 FTCDNL1E5RQL4 147 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 M0R1B8 84 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 FZD7O75084 574 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 CD8AP01732 235 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 EGR4Q05215 589 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 SCARB2Q14108 478 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 C5orf46Q6UWT4 87 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 DLEU7Q6UYE1 221 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 CREB3L2Q70SY1 520 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 BOD1Q96IK1 185 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 ZNF607Q96SK3 696 aa18.39■□□□□ 0.53
CHFR-217ENST00000540537 CPPED1Q9BRF8 314 aaPredicted RBP18.39■□□□□ 0.53
CHFR-217ENST00000540537 LEF1Q9UJU2 399 aaPredicted RBP18.39■□□□□ 0.53
CHFR-217ENST00000540537 PRORSD1PA6NEY8 169 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 PNMTP11086 282 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 H2AFXP16104 143 aaPredicted RBP18.38■□□□□ 0.53
CHFR-217ENST00000540537 SLC6A2P23975 617 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 HTR2AP28223 471 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 SPOCK1Q08629 439 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 ADRM1Q16186 407 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 CLEC12BQ2HXU8 276 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 AGAP6Q5VW22 663 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 SLC22A25Q6T423 547 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 COMTD1Q86VU5 262 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 EPHX4Q8IUS5 362 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 HIPK4Q8NE63 616 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 BHLHE22Q8NFJ8 381 aaPredicted RBP18.38■□□□□ 0.53
CHFR-217ENST00000540537 DNAJA4Q8WW22 397 aaPredicted RBP18.38■□□□□ 0.53
CHFR-217ENST00000540537 KTI12Q96EK9 354 aaPredicted RBP18.38■□□□□ 0.53
CHFR-217ENST00000540537 ZNF385DQ9H6B1 395 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 POU2F3Q9UKI9 436 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 TRIM33Q9UPN9 1127 aa18.38■□□□□ 0.53
CHFR-217ENST00000540537 A0A1B0GWA3 101 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 E7EQL1 145 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 OR2T1O43869 369 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 TPST1O60507 370 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 WNT11O96014 354 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 GTF2E2P29084 291 aaKnown RBP18.37■□□□□ 0.53
CHFR-217ENST00000540537 RPS5P46782 204 aaKnown RBP18.37■□□□□ 0.53
CHFR-217ENST00000540537 SELENOPP49908 381 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 SLC25A3Q00325 362 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 TNK1Q13470 666 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 RUNDC3AQ59EK9 446 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 DEPDC4Q8N2C3 294 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 DPP10Q8N608 796 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 SLC38A4Q969I6 547 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 SLC25A36Q96CQ1 311 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 DHRS9Q9BPW9 319 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 SIKE1Q9BRV8 207 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 C1QTNF6Q9BXI9 259 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 EVA1AQ9H8M9 152 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 BARX1Q9HBU1 254 aaPredicted RBP18.37■□□□□ 0.53
CHFR-217ENST00000540537 OBP2BQ9NPH6 170 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 TESQ9UGI8 421 aaKnown RBP18.37■□□□□ 0.53
CHFR-217ENST00000540537 ANGPT4Q9Y264 503 aa18.37■□□□□ 0.53
CHFR-217ENST00000540537 ZNF587BE7ETH6 402 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 SERPINB7O75635 380 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 KRT33AO76009 404 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 IGHV4-39P01824 125 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 TTKP33981 857 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 PRPS1P60891 318 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 NCALDP61601 193 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 VEZF1Q14119 521 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 GLIPR1L2Q4G1C9 344 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 FAM69AQ5T7M9 428 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 FAM91A1Q658Y4 838 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 NIPAL3Q6P499 406 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 KLHL24Q6TFL4 600 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 DHDDSQ86SQ9 333 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 TSPEARQ8WU66 669 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 THOC1Q96FV9 657 aaKnown RBP18.36■□□□□ 0.53
CHFR-217ENST00000540537 NDUFAF1Q9Y375 327 aa18.36■□□□□ 0.53
CHFR-217ENST00000540537 ABCA2Q9BZC7 2435 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 ALPK2Q86TB3 2170 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 AIM2O14862 343 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 EDF1O60869 148 aaKnown RBP18.35■□□□□ 0.53
CHFR-217ENST00000540537 RGS8P57771 180 aaPredicted RBP18.35■□□□□ 0.53
CHFR-217ENST00000540537 RBBP4Q09028 425 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 ALG10BQ5I7T1 473 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 C11orf71Q6IPW1 123 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 ULK3Q6PHR2 472 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 B3GLCTQ6Y288 498 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 NET1Q7Z628 596 aaPredicted RBP18.35■□□□□ 0.53
CHFR-217ENST00000540537 ARMC8Q8IUR7 673 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 TAAR8Q969N4 342 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 SLC47A1Q96FL8 570 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 HS6ST2Q96MM7 605 aa18.35■□□□□ 0.53
CHFR-217ENST00000540537 ALKBH3Q96Q83 286 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms