RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ADAMTS16Q8TE57 1224 aa11.85□□□□□ -0.51
CCDC130-202ENST00000540216 HSD17B8Q92506 261 aa11.85□□□□□ -0.51
CCDC130-202ENST00000540216 SLC25A36Q96CQ1 311 aa11.85□□□□□ -0.51
CCDC130-202ENST00000540216 CCT8L2Q96SF2 557 aa11.85□□□□□ -0.51
CCDC130-202ENST00000540216 SLC19A3Q9BZV2 496 aa11.85□□□□□ -0.51
CCDC130-202ENST00000540216 ASB6Q9NWX5 421 aa11.85□□□□□ -0.51
CCDC130-202ENST00000540216 C6orf203Q9P0P8 240 aaPredicted RBP11.85□□□□□ -0.51
CCDC130-202ENST00000540216 SH3GLB1Q9Y371 365 aa11.85□□□□□ -0.51
CCDC130-202ENST00000540216 MYO9AB2RTY4 2548 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 LOC102725191A0A1B0GVB3 256 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 DEFB108AA8MXU0 73 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 GSTA4O15217 222 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 FAM107AO95990 144 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 MT-ATP6P00846 226 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 GSK3BP49841 420 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 PSME3P61289 254 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 SELENOWP63302 87 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 BEX5Q5H9J7 111 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 GKAP1Q5VSY0 366 aaPredicted RBP11.84□□□□□ -0.51
CCDC130-202ENST00000540216 ANKRD34AQ69YU3 496 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 BHLHA15Q7RTS1 189 aaPredicted RBP11.84□□□□□ -0.51
CCDC130-202ENST00000540216 P2RY8Q86VZ1 359 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 RBM45Q8IUH3 476 aaKnown RBP11.84□□□□□ -0.51
CCDC130-202ENST00000540216 UBE2J2Q8N2K1 259 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 ZIC4Q8N9L1 334 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 POMGNT2Q8NAT1 580 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 TAAR8Q969N4 342 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 S100PBPQ96BU1 408 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 ZC3HAV1LQ96H79 300 aaKnown RBP11.84□□□□□ -0.51
CCDC130-202ENST00000540216 KCTD14Q9BQ13 255 aaPredicted RBP11.84□□□□□ -0.51
CCDC130-202ENST00000540216 ZNF426Q9BUY5 554 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 NDE1Q9NXR1 346 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 FAM53CQ9NYF3 392 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 TAGLN3Q9UI15 199 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 PDZD2O15018 2839 aa11.84□□□□□ -0.51
CCDC130-202ENST00000540216 OR6C65A6NJZ3 312 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 M0R082 166 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 CXCR6O00574 342 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 OR5F1O95221 314 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 THBDP07204 575 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 THRBP10828 461 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 IGHV1-2P23083 117 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 EDNRAP25101 427 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 GRPRP30550 384 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 NTF4P34130 210 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 MNAT1P51948 309 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 NR1H2P55055 460 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 C1QTNF12Q5T7M4 302 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 TTC33Q6PID6 262 aaPredicted RBP11.83□□□□□ -0.52
CCDC130-202ENST00000540216 DEF8Q6ZN54 512 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 C22orf34Q6ZV56 151 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 CREB3L2Q70SY1 520 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 H1FNTQ75WM6 255 aaPredicted RBP11.83□□□□□ -0.52
CCDC130-202ENST00000540216 AAED1Q7RTV5 226 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 ABHD12BQ7Z5M8 362 aaPredicted RBP11.83□□□□□ -0.52
CCDC130-202ENST00000540216 ZNF433Q8N7K0 673 aaPredicted RBP11.83□□□□□ -0.52
CCDC130-202ENST00000540216 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 NINJ1Q92982 152 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 SLC41A3Q96GZ6 507 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 OXGR1Q96P68 337 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 ZNF385AQ96PM9 386 aaKnown RBP11.83□□□□□ -0.52
CCDC130-202ENST00000540216 ZNF587Q96SQ5 575 aaPredicted RBP11.83□□□□□ -0.52
CCDC130-202ENST00000540216 ASPNQ9BXN1 380 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 SLCO5A1Q9H2Y9 848 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 NGBQ9NPG2 151 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 TAS2R16Q9NYV7 291 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 UPB1Q9UBR1 384 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 SLC7A7Q9UM01 511 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 RCE1Q9Y256 329 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 CCDC168Q8NDH2 2452 aa11.83□□□□□ -0.52
CCDC130-202ENST00000540216 ENO4A6NNW6 628 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 PDLIM1O00151 329 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 SIAH2O43255 324 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 AKAP8O43823 692 aaKnown RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 SHOX2O60902 331 aaPredicted RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 LYZL6O75951 148 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 LYPD3O95274 346 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 IGHV3-9P01782 118 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 BGLAPP02818 100 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 NQO1P15559 274 aaKnown RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 ZNF43P17038 809 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 GGT1P19440 569 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 IFNA8P32881 189 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 RBM34P42696 430 aaKnown RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 TAS2R41P59536 307 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 TIMM23BQ5SRD1 257 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 OR7E24Q6IFN5 339 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 LSRQ86X29 649 aaPredicted RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 P3H2Q8IVL5 708 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 PGAM4Q8N0Y7 254 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 C10orf53Q8N6V4 93 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 C1orf162Q8NEQ5 155 aaPredicted RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 GEMIN6Q8WXD5 167 aaKnown RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 TPD52L3Q96J77 140 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 PLEKHF2Q9H8W4 249 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 MRPL39Q9NYK5 338 aaKnown RBP11.82□□□□□ -0.52
CCDC130-202ENST00000540216 B3GAT1Q9P2W7 334 aa11.82□□□□□ -0.52
CCDC130-202ENST00000540216 KLF4O43474 513 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms