RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 OR2V1Q8NHB1 315 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 DNAJC9Q8WXX5 260 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 WDYHV1Q96HA8 205 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TNFRSF13CQ96RJ3 184 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 DOPEY2Q9Y3R5 2298 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TRAV27A0A087WT01 109 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 M0R082 166 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CXCL13O43927 109 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PTP4A3O75365 173 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SOX14O95416 240 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 IGFBP1P08833 259 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CPN1P15169 458 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 KLK2P20151 261 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SLC9A3P48764 834 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 FXYD6P3P58550 94 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ESPL1Q14674 2120 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MFSD13AQ14CX5 517 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 IGFBP7Q16270 282 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 KRTCAP3Q53RY4 240 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ARHGAP11AQ6P4F7 1023 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RASSF6Q6ZTQ3 369 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 FGD2Q7Z6J4 655 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 GHDCQ8N2G8 530 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PARP8Q8N3A8 854 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MEIOBQ8N635 442 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZNF417Q8TAU3 575 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 OSTF1Q92882 214 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZNF587Q96SQ5 575 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SLX1AQ9BQ83 275 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SRXN1Q9BYN0 137 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 VCXQ9H320 206 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 VCX3BQ9H321 246 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ASH1LQ9NR48 2969 aaKnown RBP16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ALKBH4Q9NXW9 302 aa16.96■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MED12Q93074 2177 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 NPIPA2E9PIF3 369 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 NPIPA3F8WFD2 350 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 AKR7A3O95154 331 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SNAP29O95721 258 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 OSMP13725 252 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 POLR2IP36954 125 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 EIF1AXP47813 144 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RAD23AP54725 363 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CARD18P57730 90 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 NUP107P57740 925 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RPS4XP62701 263 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CSNK2A1P68400 391 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZIK1Q3SY52 487 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZBED5Q49AG3 693 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZNF620Q6ZNG0 422 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 OR5J2Q8NH18 312 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZNF845Q96IR2 970 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PLA2G12AQ9BZM1 189 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PRDM14Q9GZV8 571 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 EGLN3Q9H6Z9 239 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MCCC2Q9HCC0 563 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CORINQ9Y5Q5 1042 aa16.95■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ZNF814B7Z6K7 855 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 BLOC1S5-TXNDC5H3BN57 136 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 HIST1H2ABP04908 130 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 GTF2E2P29084 291 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 EPHA2P29317 976 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 AQP4P55087 323 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RAC3P60763 192 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SLC35A1P78382 337 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SLC36A3Q495N2 470 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PDSS1Q5T2R2 415 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 IZUMO2Q6UXV1 221 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 HIST3H2AQ7L7L0 130 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 NANOGNBQ7Z5D8 188 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TMEM99Q8N816 258 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 HIST1H2ACQ93077 130 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SARAFQ96BY9 339 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ASPNQ9BXN1 380 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 ENKD1Q9H0I2 346 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 OR52D1Q9H346 318 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SMPD3Q9NY59 655 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MRPL39Q9NYK5 338 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 IL20RAQ9UHF4 553 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CAMK2AQ9UQM7 478 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 HIF3AQ9Y2N7 669 aa16.94■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TSPAN19P0C672 248 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 UQCRC1P31930 480 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 AQP2P41181 271 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 P2RY4P51582 365 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 H3F3AP84243 136 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 PMS2P3Q13401 168 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SGCBQ16585 318 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RFX4Q33E94 735 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 THSD4Q6ZMP0 1018 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 H1FNTQ75WM6 255 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 SCAIQ8N9R8 606 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 OR8D4Q8NGM9 314 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MOSPD2Q8NHP6 518 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CPT1CQ8TCG5 803 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 MBOAT4Q96T53 435 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TACO1Q9BSH4 297 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 TOR3AQ9H497 397 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 RIBC2Q9H4K1 309 aa16.93■□□□□ 0.3
TNFRSF1A-213ENST00000540022 CHST11Q9NPF2 352 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms