RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 MRPL33O75394 65 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 LYZL6O75951 148 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 BGLAPP02818 100 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 LOXP28300 417 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 GRPRP30550 384 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 ITGADQ13349 1161 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 P2RY6Q15077 328 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 FBXW9Q5XUX1 488 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 C5orf46Q6UWT4 87 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 CASP12Q6UXS9 341 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 ANKS4BQ8N8V4 417 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 ZNF417Q8TAU3 575 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 TPD52L3Q96J77 140 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 MOGAT1Q96PD6 335 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 ZNF587Q96SQ5 575 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 TMEM43Q9BTV4 400 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 HDHD5Q9BXW7 423 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 FANCFQ9NPI8 374 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 ZNF226Q9NYT6 803 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 SLC7A7Q9UM01 511 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 SLC9A8Q9Y2E8 581 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 AKAP9Q99996 3911 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 TRAPPC13A5PLN9 417 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 CXCR6O00574 342 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 KLF4O43474 513 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 OR2T1O43869 369 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 DCTN3O75935 186 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 CNOT4O95628 575 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 IFNA14P01570 189 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 PPP3CBP16298 524 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 COX5AP20674 150 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 SELENOWP63302 87 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 FBXW10Q5XX13 1052 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 CREB3L2Q70SY1 520 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 CDH24Q86UP0 819 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 EPHX4Q8IUS5 362 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 UBE2J2Q8N2K1 259 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 ZNF433Q8N7K0 673 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 STEAP2Q8NFT2 490 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 KISS1RQ969F8 398 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 TMEM45BQ96B21 275 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 PRSS27Q9BQR3 290 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 OR10A4Q9H209 315 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 SLC7A10Q9NS82 523 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 B3GAT1Q9P2W7 334 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 TAGLN3Q9UI15 199 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 RASD1Q9Y272 281 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 ABCA4P78363 2273 aa16.15■□□□□ 0.18
SNRPA1-203ENST00000540017 VAMP5O95183 116 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 GOSR1O95249 250 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 FAM107AO95990 144 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 NCK1P16333 377 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 FUT4P22083 530 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 IL32P24001 234 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 TAB1Q15750 504 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 TSPO2Q5TGU0 170 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 DEF8Q6ZN54 512 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 BHLHA15Q7RTS1 189 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 AAED1Q7RTV5 226 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 VTCN1Q7Z7D3 282 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 FITM2Q8N6M3 262 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 RNF148Q8N7C7 305 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 OR6S1Q8NH40 331 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 PIK3IP1Q96FE7 263 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 SLC41A3Q96GZ6 507 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 HS3ST6Q96QI5 342 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 KCTD14Q9BQ13 255 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 ZNF426Q9BUY5 554 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 PLEKHF2Q9H8W4 249 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 SPAG4Q9NPE6 437 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 MALT1Q9UDY8 824 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 ADAM21Q9UKJ8 722 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 SPG11Q96JI7 2443 aa16.14■□□□□ 0.17
SNRPA1-203ENST00000540017 OTOGQ6ZRI0 2925 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 MS4A18H0YCH9 400 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 PDLIM1O00151 329 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 GSTA4O15217 222 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 HPRP00739 348 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 GTF2E2P29084 291 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 DNAJA1P31689 397 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 SLC25A3Q00325 362 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 LGALS3BPQ08380 585 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 FAPQ12884 760 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 PIN1Q13526 163 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 MS4A18Q3C1V0 323 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 ALKBH2Q6NS38 261 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 SEZ6L2Q6UXD5 910 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 H1FNTQ75WM6 255 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 WFDC8Q8IUA0 241 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 NKAIN4Q8IVV8 208 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 FAM156AQ8NDB6 213 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 EPYCQ99645 322 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 PARPBPQ9NWS1 579 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 EGFL7Q9UHF1 273 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 B3GALT5Q9Y2C3 310 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 SNX13Q9Y5W8 968 aa16.13■□□□□ 0.17
SNRPA1-203ENST00000540017 ITGA5P08648 1049 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 HLA-DOBP13765 273 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 GGT1P19440 569 aa16.12■□□□□ 0.17
SNRPA1-203ENST00000540017 SELENOPP49908 381 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms