RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CTSCP53634 463 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 SIM1P81133 766 aaPredicted RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 PLEKHS1Q5SXH7 462 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 ATG9BQ674R7 924 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 MTFR2Q6P444 385 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 LHFPL2Q6ZUX7 228 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 VASH2Q86V25 355 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 ZDHHC1Q8WTX9 485 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 XAGE5Q8WWM1 108 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 EXTL1Q92935 676 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 GLYATL1Q969I3 302 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 DTD2Q96FN9 168 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 SCMH1Q96GD3 660 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 ZNF764Q96H86 408 aaPredicted RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 COQ10AQ96MF6 247 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 DECR2Q9NUI1 292 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 TMEM74BQ9NUR3 256 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 FAM118AQ9NWS6 357 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 ARL15Q9NXU5 204 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 GOLGA4Q13439 2230 aaKnown RBP11.61□□□□□ -0.55
DDX55-206ENST00000539934 ADAMTS9Q9P2N4 1935 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 AP4M1O00189 453 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 FLRT2O43155 660 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 CDC14BO60729 498 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 C8GP07360 202 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 HIST1H2AGP0C0S8 130 aaPredicted RBP11.61□□□□□ -0.55
DDX55-206ENST00000539934 HGFP14210 728 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 HIST1H2ADP20671 130 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 ATP4BP51164 291 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 ERVPABLB-1P60509 514 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 SLBPQ14493 270 aaKnown RBP eCLIP11.61□□□□□ -0.55
DDX55-206ENST00000539934 SYT6Q5T7P8 510 aaPredicted RBP11.61□□□□□ -0.55
DDX55-206ENST00000539934 DEFB119Q8N690 84 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 UXS1Q8NBZ7 420 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 OR4F6Q8NGB9 312 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 OR2I1PQ8NGU4 316 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 OSTF1Q92882 214 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 C3orf49Q96BT1 292 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 HIST1H2AHQ96KK5 128 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 ACOX2Q99424 681 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 HIST1H2AJQ99878 128 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 SLC30A2Q9BRI3 323 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 H2AFJQ9BTM1 129 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 CD244Q9BZW8 370 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 OR52A5Q9H2C5 316 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 C14orf119Q9NWQ9 140 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 CACNA2D2Q9NY47 1150 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 THAP10Q9P2Z0 257 aaPredicted RBP11.61□□□□□ -0.55
DDX55-206ENST00000539934 FBXO7Q9Y3I1 522 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 KNL1Q8NG31 2342 aa11.61□□□□□ -0.55
DDX55-206ENST00000539934 COL12A1Q99715 3063 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 OR7A17O14581 309 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 APODP05090 189 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 MPC1LP0DKB6 136 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ZNF44P15621 663 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 CCNOP22674 350 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 CEACAM8P31997 349 aaPredicted RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 NAA10P41227 235 aaPredicted RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 GDF5P43026 501 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 RORCP51449 518 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ZNF81P51508 661 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 PPP2CBP62714 309 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 PPP2CAP67775 309 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 HSD11B2P80365 405 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 C2orf80Q0P641 193 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 CEACAM7Q14002 265 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 LGALSLQ3ZCW2 172 aaPredicted RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 SYTL3Q4VX76 610 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 BRICD5Q6PL45 260 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 CATSPERDQ86XM0 798 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 PHYKPLQ8IUZ5 450 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 VRK3Q8IV63 474 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 TMEFF1Q8IYR6 380 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 FAM181AQ8N9Y4 354 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 NLGN4YQ8NFZ3 816 aaPredicted RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 OR52N4Q8NGI2 321 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 OR9I1Q8NGQ6 314 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 HMGCLL1Q8TB92 370 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 NUS1Q96E22 293 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ZNF426Q9BUY5 554 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 SLC12A9Q9BXP2 914 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 SAP130Q9H0E3 1048 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 MAN2C1Q9NTJ4 1040 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 MS4A12Q9NXJ0 267 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ZNF282Q9UDV7 671 aaPredicted RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 OR52A1Q9UKL2 312 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ZFC3H1O60293 1989 aaKnown RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 URB1O60287 2271 aaKnown RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 NAV2Q8IVL1 2488 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 TMEM72A0PK05 275 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 CBY3A6NI87 242 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 SLC22A31A6NKX4 558 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 RPLP1P05386 114 aaKnown RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 NQO2P16083 231 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 TMEM115Q12893 351 aaPredicted RBP11.6□□□□□ -0.55
DDX55-206ENST00000539934 PLA2G7Q13093 441 aa11.6□□□□□ -0.55
DDX55-206ENST00000539934 ARL6IP1Q15041 203 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms