RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 EEF1E1O43324 174 aaKnown RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 PLRG1O43660 514 aaKnown RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 LANCL1O43813 399 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 ARL6IP5O75915 188 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 EIF4EP06730 217 aaKnown RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 H2AFB1P0C5Y9 115 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 OR12D1P0DN82 309 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 NR2F1P10589 423 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 TFPIP10646 304 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 CXCL3P19876 107 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 NFYAP23511 347 aaPredicted RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 GIFP27352 417 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 PRKAR1BP31321 381 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 BSGP35613 385 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 OMPP47874 163 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 DUSP3P51452 185 aaPredicted RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 MAP2K6P52564 334 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 BLVRAP53004 296 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 B2MP61769 119 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 CXADRP78310 365 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 PRSS53Q2L4Q9 553 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 PGGHGQ32M88 737 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 SPDYE7PQ495Y7 208 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 CYP27C1Q4G0S4 372 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 SYTL3Q4VX76 610 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF385CQ66K41 422 aaPredicted RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 UNQ9370/PRO34162Q6UXP9 181 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 GDPD4Q6W3E5 623 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 ASB18Q6ZVZ8 466 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 MBOAT2Q6ZWT7 520 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 USP53Q70EK8 1073 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 MEPCEQ7L2J0 689 aaKnown RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 CXXC5Q7LFL8 322 aaKnown RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 TECPR1Q7Z6L1 1165 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 LHFPL3Q86UP9 236 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 FAM129CQ86XR2 697 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 LURAP1LQ8IV03 231 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 SIAH3Q8IW03 269 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 LINC00518Q8N0U6 118 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 SAMD12Q8N8I0 201 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 OR2T33Q8NG76 320 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 OR6M1Q8NGM8 313 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 OR8D4Q8NGM9 314 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 OR2T35Q8NGX2 323 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 OR5W2Q8NH69 310 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 WFDC5Q8TCV5 224 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 SMIM4Q8WVI0 70 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 ELP4Q96EB1 424 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 MED8Q96G25 268 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 C12orf66Q96MD2 445 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 SFXN2Q96NB2 322 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 LRFN5Q96NI6 719 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 DUSP23Q9BVJ7 150 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 TMED9Q9BVK6 235 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 TM6SF2Q9BZW4 377 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 DPEP2Q9H4A9 486 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 GPN1Q9HCN4 374 aaPredicted RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 HCN3Q9P1Z3 774 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 RPS6KB2Q9UBS0 482 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 B4GALT6Q9UBX8 382 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 MALT1Q9UDY8 824 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 ZFR2Q9UPR6 939 aaKnown RBP7.04□□□□□ -1.28
CCDC60-204ENST00000539847 BAIAP2Q9UQB8 552 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 RASD1Q9Y272 281 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 CA5BQ9Y2D0 317 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF175Q9Y473 711 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 PIEZO2Q9H5I5 2752 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 TMEM131Q92545 1883 aa7.04□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF106Q9H2Y7 1883 aaKnown RBP7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TBC1D3DA0A087WVF3 549 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TBC1D3IA0A087WXS9 549 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TBC1D3EA0A087X179 549 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TBC1D3KA0A087X1G2 549 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 C2orf92A0A1B0GVN3 265 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TBC1D3FA6NER0 549 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TBC1D3LB9A6J9 549 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 G3V3Q6 166 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 GABARAPH6UMI1 98 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF593O00488 134 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-204ENST00000539847 OGG1O15527 345 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 SIGLEC6O43699 453 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 SSNA1O43805 119 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 GALR3O60755 368 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TIAF1O95411 115 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 AGR2O95994 175 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 CFDP00746 253 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TGFB1P01137 390 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 TBC1D3HP0C7X1 549 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 ALPPL2P10696 532 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 PPP3CBP16298 524 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 PRKACAP17612 351 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 RAB3BP20337 219 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 DRD3P35462 400 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 ATP6V1E1P36543 226 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 HOXA1P49639 335 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-204ENST00000539847 SCAND1P57086 179 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 ACTC1P68032 377 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 ACTA1P68133 377 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 PRAMEF14Q5SWL7 426 aa7.03□□□□□ -1.28
CCDC60-204ENST00000539847 KHDRBS2Q5VWX1 349 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms