RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 GSSP48637 474 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 ARFIP1P53367 373 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 RPS14P62263 151 aaKnown RBP4.47□□□□□ -1.69
TRAV11-201ENST00000539512 DAZ2Q13117 558 aaKnown RBP4.47□□□□□ -1.69
TRAV11-201ENST00000539512 VGLL4Q14135 290 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 FILIP1LQ4L180 1135 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 CASC10Q5T4H9 136 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 OR2G6Q5TZ20 316 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 C6orf89Q6UWU4 347 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 BHLHE23Q8NDY6 225 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 FAM83FQ8NEG4 500 aaPredicted RBP4.47□□□□□ -1.69
TRAV11-201ENST00000539512 CCDC54Q8NEL0 328 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 C10orf35Q96D05 121 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 ZNF799Q96GE5 643 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 IFT74Q96LB3 600 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 TCEANC2Q96MN5 208 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 LINC00167Q96N53 147 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 ZNF641Q96N77 438 aaPredicted RBP4.47□□□□□ -1.69
TRAV11-201ENST00000539512 PSKH2Q96QS6 385 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 SDHCQ99643 169 aaPredicted RBP4.47□□□□□ -1.69
TRAV11-201ENST00000539512 NT5C3AQ9H0P0 336 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 GBA3Q9H227 469 aa4.47□□□□□ -1.69
TRAV11-201ENST00000539512 DAZ3Q9NR90 486 aaKnown RBP4.47□□□□□ -1.69
TRAV11-201ENST00000539512 CA11O75493 328 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 IL1BP01584 269 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 NCK1P16333 377 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 ZNF17P17021 662 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 NPR2P20594 1047 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 CCNCP24863 283 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 CCNE1P24864 410 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 NUDT1P36639 197 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 DDOSTP39656 456 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 HLCSP50747 726 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 DUSP3P51452 185 aaPredicted RBP4.46□□□□□ -1.7
TRAV11-201ENST00000539512 OGDHQ02218 1023 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 UNC119Q13432 240 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 OR5I1Q13606 314 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 GPR157Q5UAW9 335 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 CENPPQ6IPU0 288 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 ECHDC2Q86YB7 292 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 C6orf223Q8N319 242 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 TRPV1Q8NER1 839 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 MAGEE2Q8TD90 523 aaPredicted RBP4.46□□□□□ -1.7
TRAV11-201ENST00000539512 SCFD1Q8WVM8 642 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 ARPC1AQ92747 370 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 SLC41A3Q96GZ6 507 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 ZBTB18Q99592 522 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 C20orf85Q9H1P6 137 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 SGK2Q9HBY8 427 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 MRPL47Q9HD33 250 aaKnown RBP4.46□□□□□ -1.7
TRAV11-201ENST00000539512 GLRX2Q9NS18 164 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 KCNIP3Q9Y2W7 256 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 SLC25A15Q9Y619 301 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 CACNG2Q9Y698 323 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 CC2D2AQ9P2K1 1620 aa4.46□□□□□ -1.7
TRAV11-201ENST00000539512 RB1CC1Q8TDY2 1594 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 OR5B21A6NL26 309 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 MPHOSPH10O00566 681 aaKnown RBP4.45□□□□□ -1.7
TRAV11-201ENST00000539512 SLC2A5P22732 501 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 SLC26A3P40879 764 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 ZMYND11Q15326 602 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 CYTH1Q15438 398 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 ZNF530Q6P9A1 599 aaPredicted RBP4.45□□□□□ -1.7
TRAV11-201ENST00000539512 ZNF546Q86UE3 836 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 PAQR7Q86WK9 346 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 LRRC75A-AS1Q8N1F1 130 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 EIF1ADQ8N9N8 165 aaKnown RBP4.45□□□□□ -1.7
TRAV11-201ENST00000539512 BLOC1S5Q8TDH9 187 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 MYDGFQ969H8 173 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 TM4SF19Q96DZ7 209 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 ITCHQ96J02 903 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 RNF167Q9H6Y7 350 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 RANBP3Q9H6Z4 567 aaPredicted RBP4.45□□□□□ -1.7
TRAV11-201ENST00000539512 COX16Q9P0S2 106 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 FANCIQ9NVI1 1328 aa4.45□□□□□ -1.7
TRAV11-201ENST00000539512 A0A1B0GVL5 298 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 RBMY1BA6NDE4 496 aaKnown RBP4.44□□□□□ -1.7
TRAV11-201ENST00000539512 A6NDX4 124 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 RBMY1EA6NEQ0 496 aaKnown RBP4.44□□□□□ -1.7
TRAV11-201ENST00000539512 TIMM8AO60220 97 aaPredicted RBP4.44□□□□□ -1.7
TRAV11-201ENST00000539512 RBMY1DP0C7P1 496 aaKnown RBP4.44□□□□□ -1.7
TRAV11-201ENST00000539512 RBMY1A1P0DJD3 496 aaKnown RBP4.44□□□□□ -1.7
TRAV11-201ENST00000539512 TBPP20226 339 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 CTRLP40313 264 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 ERVK-25P63136 954 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 CDK16Q00536 496 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 ENPP6Q6UWR7 440 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 ZNF620Q6ZNG0 422 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 PRSS41Q7RTY9 318 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 NBPF5PQ86XG9 351 aaPredicted RBP4.44□□□□□ -1.7
TRAV11-201ENST00000539512 ZNF679Q8IYX0 411 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 ZCCHC7Q8N3Z6 543 aaKnown RBP4.44□□□□□ -1.7
TRAV11-201ENST00000539512 FAM133AQ8N9E0 248 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 Q8N9W7 124 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 PYROXD1Q8WU10 500 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 NDRG1Q92597 394 aaKnown RBP4.44□□□□□ -1.7
TRAV11-201ENST00000539512 OR11A1Q9GZK7 315 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 GIN1Q9NXP7 522 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 EXTL2Q9UBQ6 330 aa4.44□□□□□ -1.7
TRAV11-201ENST00000539512 NEU3Q9UQ49 428 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms