RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 IGHV3-9P01782 118 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 ATP6V1B2P21281 511 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 MS4A2Q01362 244 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 PDK3Q15120 406 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 ANKRD34AQ69YU3 496 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 FKBP9P1Q75LS8 142 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 WDFY1Q8IWB7 410 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 LRRC17Q8N6Y2 441 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 PFN4Q8NHR9 129 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF417Q8TAU3 575 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 LZICQ8WZA0 190 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 ZNF587Q96SQ5 575 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-206ENST00000539417 MAN2C1Q9NTJ4 1040 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 NDE1Q9NXR1 346 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 B3GAT1Q9P2W7 334 aa13.96□□□□□ -0.17
RPAIN-206ENST00000539417 HRNRQ86YZ3 2850 aaPredicted RBP13.96□□□□□ -0.18
RPAIN-206ENST00000539417 ITPR2Q14571 2701 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 HNRNPRO43390 633 aaKnown RBP13.95□□□□□ -0.18
RPAIN-206ENST00000539417 PIP5K1CO60331 668 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 HPRP00739 348 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 CD79BP40259 229 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 OR3A2P47893 321 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 FOXG1P55316 489 aaPredicted RBP13.95□□□□□ -0.18
RPAIN-206ENST00000539417 VLDLRP98155 873 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 IQCCQ4KMZ1 466 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 FAM69AQ5T7M9 428 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 CYP2R1Q6VVX0 501 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 GPAT4Q86UL3 456 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 MEX3DQ86XN8 651 aaKnown RBP13.95□□□□□ -0.18
RPAIN-206ENST00000539417 EPHX4Q8IUS5 362 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 GABRG1Q8N1C3 465 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 OR9K2Q8NGE7 335 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 GEMIN6Q8WXD5 167 aaKnown RBP13.95□□□□□ -0.18
RPAIN-206ENST00000539417 C7orf34Q96L11 122 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 C20orf141Q9NUB4 165 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 MAGEL2Q9UJ55 1249 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 APCP25054 2843 aa13.95□□□□□ -0.18
RPAIN-206ENST00000539417 MS4A18H0YCH9 400 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 hCG_2039718K7EN88 272 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 DIRAS1O95057 198 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 CH25HO95992 272 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 SEMG1P04279 462 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 IFNW1P05000 195 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 HLA-DOBP13765 273 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 POU2F1P14859 743 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 UGT2B10P36537 528 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 KRTAP10-9P60411 292 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 LGALS3BPQ08380 585 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 MS4A18Q3C1V0 323 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 TTC33Q6PID6 262 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-206ENST00000539417 STAC2Q6ZMT1 411 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 GALNT5Q7Z7M9 940 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 CXorf67Q86X51 503 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-206ENST00000539417 PRRC1Q96M27 445 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 KLHL4Q9C0H6 718 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 C1orf21Q9H246 121 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 FOXD3Q9UJU5 478 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-206ENST00000539417 RPS6KA6Q9UK32 745 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 NOSIPQ9Y314 301 aaKnown RBP13.94□□□□□ -0.18
RPAIN-206ENST00000539417 CSMD2Q7Z408 3487 aa13.94□□□□□ -0.18
RPAIN-206ENST00000539417 OR2T1O43869 369 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 FUT1P19526 365 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 KIR2DL3P43628 341 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 ZNF74Q16587 644 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 TMEM225Q6GV28 225 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 C5orf46Q6UWT4 87 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 CREB3L2Q70SY1 520 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 SLC46A3Q7Z3Q1 461 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 C10orf53Q8N6V4 93 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 MPP4Q96JB8 637 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 NSMCE2Q96MF7 247 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 WFIKKN1Q96NZ8 548 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 THTPAQ9BU02 230 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 ELOVL5Q9NYP7 299 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 NDUFAF4Q9P032 175 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 TCRBV5S2A0A599 114 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 ADAP00813 363 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 SORDQ00796 357 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 BNIP1Q12981 228 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 TBPL2Q6SJ96 375 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 CASP12Q6UXS9 341 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 NHLRC1Q6VVB1 395 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 BEND4Q6ZU67 534 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 H1FNTQ75WM6 255 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 ZNF771Q7L3S4 317 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 OFCC1Q8IZS5 231 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 OR6S1Q8NH40 331 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 TMEM239Q8WW34 195 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 PYURFQ96I23 114 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 EPYCQ99645 322 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 TACO1Q9BSH4 297 aaKnown RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 POLR2J2Q9GZM3 115 aaKnown RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 POLR2J3Q9H1A7 115 aaKnown RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 EMC3Q9P0I2 261 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 C6orf203Q9P0P8 240 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 SAMD4AQ9UPU9 718 aaKnown RBP13.93□□□□□ -0.18
RPAIN-206ENST00000539417 ENPP4Q9Y6X5 453 aa13.93□□□□□ -0.18
RPAIN-206ENST00000539417 CACNA1DQ01668 2161 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms