RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 METAP1DQ6UB28 335 aaPredicted RBP13.47□□□□□ -0.25
CACNB1-206ENST00000539338 C6orf15Q6UXA7 325 aaPredicted RBP13.47□□□□□ -0.25
CACNB1-206ENST00000539338 NDUFAF7Q7L592 441 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 SYT13Q7L8C5 426 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 CUTCQ9NTM9 273 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 DPM1O60762 260 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 IDUAP35475 653 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 TRIM23P36406 574 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 ECH1Q13011 328 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 UBE2NLQ5JXB2 153 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 TMEM64Q6YI46 380 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 C3P1Q6ZMU1 363 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 SGPP2Q8IWX5 399 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 SLC16A11Q8NCK7 471 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 IFI44Q8TCB0 444 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 RRNAD1Q96FB5 475 aaKnown RBP13.47□□□□□ -0.25
CACNB1-206ENST00000539338 ALG12Q9BV10 488 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 DNAJB6O75190 326 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 TNFSF15O95150 251 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 EPHA1P21709 976 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 CSNK1A1P48729 337 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 SIRPAP78324 504 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 ARL6IP1Q15041 203 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 BEX5Q5H9J7 111 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 AGAP7PQ5VUJ5 663 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 HBMQ6B0K9 141 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 C12orf45Q8N5I9 185 aaPredicted RBP13.47□□□□□ -0.25
CACNB1-206ENST00000539338 LGALS14Q8TCE9 139 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 ZBTB8AQ96BR9 441 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 RNF167Q9H6Y7 350 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 MMP11P24347 488 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 TACR3P29371 465 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 PCBP4P57723 403 aaKnown RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 FOXK2Q01167 660 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 SLC48A1Q6P1K1 146 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 ABHD17CQ6PCB6 329 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 COX15Q7KZN9 410 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 TMEM185AQ8NFB2 350 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 SENP5Q96HI0 755 aaPredicted RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 METTL17Q9H7H0 456 aaPredicted RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 ARID1BQ8NFD5 2236 aaPredicted RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 A0A1B0GWA3 101 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 DOK2O60496 412 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 TSPAN15O95858 294 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF28P17035 718 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 DLX5P56178 289 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 RAB5BP61020 215 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 UBE2NP61088 152 aaKnown RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 FOXB2Q5VYV0 432 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 SLX4IPQ5VYV7 408 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 SFXN4Q6P4A7 337 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 C19orf47Q8N9M1 422 aaKnown RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 ABHD4Q8TB40 342 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 PRRT1Q99946 306 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 C1GALT1Q9NS00 363 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 PHIPQ8WWQ0 1821 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 LAMB2P55268 1798 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 TRIM64A6NGJ6 449 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 POM121CA8CG34 1229 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 FTCDNL1E5RQL4 147 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 CR2P20023 1033 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 FAM219BQ5XKK7 198 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 MEX3BQ6ZN04 569 aaKnown RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 Q6ZNX1 250 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 GLB1L2Q8IW92 636 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 OR5T1Q8NG75 326 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 OR2M2Q96R28 347 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 UTP23Q9BRU9 249 aaKnown RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 PBDC1Q9BVG4 233 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 HCAR1Q9BXC0 346 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.25
CACNB1-206ENST00000539338 THAP10Q9P2Z0 257 aaPredicted RBP13.46□□□□□ -0.25
CACNB1-206ENST00000539338 EVPLQ92817 2033 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 FUCA1P04066 466 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 TAS2R31P59538 309 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 ZNF595Q8IYB9 648 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 CLDN22Q8N7P3 220 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 ARL11Q969Q4 196 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 GDF15Q99988 308 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 HINT2Q9BX68 163 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 C11orf54Q9H0W9 315 aaPredicted RBP13.46□□□□□ -0.26
CACNB1-206ENST00000539338 IKZF5Q9H5V7 419 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 SLC6A20Q9NP91 592 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 THSD7AQ9UPZ6 1657 aa13.46□□□□□ -0.26
CACNB1-206ENST00000539338 ZNF593O00488 134 aaPredicted RBP13.45□□□□□ -0.26
CACNB1-206ENST00000539338 GAPDHSO14556 408 aaPredicted RBP13.45□□□□□ -0.26
CACNB1-206ENST00000539338 PRICKLE3O43900 615 aaPredicted RBP13.45□□□□□ -0.26
CACNB1-206ENST00000539338 GPRIN2O60269 458 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 CRYZL1O95825 349 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 CD79AP11912 226 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 CCR5P51681 352 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 EEF1A1P68104 462 aaKnown RBP13.45□□□□□ -0.26
CACNB1-206ENST00000539338 GPLD1P80108 840 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 EIF2S3LQ2VIR3 472 aaKnown RBP13.45□□□□□ -0.26
CACNB1-206ENST00000539338 AFMIDQ63HM1 303 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 LYSMD2Q8IV50 215 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 RCBTB1Q8NDN9 531 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 ELP4Q96EB1 424 aa13.45□□□□□ -0.26
CACNB1-206ENST00000539338 OR51B6Q9H340 312 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms