RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CTRB2Q6GPI1 263 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 KCNIP4Q6PIL6 250 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 BRD3OSQ6XYD6 125 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 HSDL2Q6YN16 418 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 SLC26A11Q86WA9 606 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 CCDC65Q8IXS2 484 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 CYB561D1Q8N8Q1 229 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 OR4K14Q8NGD5 310 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 CCDC110Q8TBZ0 833 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 RAET1EQ8TD07 263 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 MCOLN3Q8TDD5 553 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 SPRYD4Q8WW59 207 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-209ENST00000539197 GIMAP1Q8WWP7 306 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 RMI2Q96E14 147 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 TAAR1Q96RJ0 339 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 NIPSNAP3BQ9BS92 247 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 ALG12Q9BV10 488 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 ZNF416Q9BWM5 594 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 TMEM117Q9H0C3 514 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 CDC42EP4Q9H3Q1 356 aaKnown RBP2.2□□□□□ -2.06
CCDC7-209ENST00000539197 SLC17A5Q9NRA2 495 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 CCL28Q9NRJ3 127 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 RASD1Q9Y272 281 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 RPL36Q9Y3U8 105 aaKnown RBP2.2□□□□□ -2.06
CCDC7-209ENST00000539197 MFHAS1Q9Y4C4 1052 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 HEBP2Q9Y5Z4 205 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 GPR179Q6PRD1 2367 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 PCM1Q15154 2024 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 IGLV11-55A0A075B6I3 123 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 IGKV1D-8A0A087WSZ0 117 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 ZNF233A6NK53 670 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 A8MUI8 341 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 IDSB3KWA1 339 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 BET1O15155 118 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 ZSCAN12O43309 604 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 STAMBPO95630 424 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 TDGF1P13385 188 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 HNF1AP20823 631 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 GPM6AP51674 278 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 TDGF1P3P51864 188 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 EFNB2P52799 333 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 UBE2SQ16763 222 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 TATDN3Q17R31 274 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 TP53I3Q53FA7 332 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 MARCH8Q5T0T0 291 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 GPRC6AQ5T6X5 926 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 PRR9Q5T870 116 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 TPGS2Q68CL5 300 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 ZNF620Q6ZNG0 422 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 PRSS41Q7RTY9 318 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 PCP2Q8IVA1 136 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 CCDC50Q8IVM0 306 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 LRRC43Q8N309 656 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 GPATCH11Q8N954 259 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 TIMD4Q96H15 378 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 C7orf34Q96L11 122 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 ECSITQ9BQ95 431 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 TUBGCP2Q9BSJ2 902 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 GLRX2Q9NS18 164 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 KCNIP1Q9NZI2 227 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 OR12D3Q9UGF7 316 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 PCYOX1Q9UHG3 505 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 KIF3AQ9Y496 699 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 ITGB4P16144 1822 aa2.19□□□□□ -2.06
CCDC7-209ENST00000539197 SF3B1O75533 1304 aaKnown RBP eCLIP2.18□□□□□ -2.064e-12■■■■■ 275.7
CCDC7-209ENST00000539197 B4GALT5O43286 388 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 OR1F1O43749 312 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 ANGPTL7O43827 346 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 SS18L1O75177 396 aaPredicted RBP2.18□□□□□ -2.06
CCDC7-209ENST00000539197 ADCY5O95622 1261 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 PTGDSP41222 190 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 CXCL5P42830 114 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 CRISP3P54108 245 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 MESDQ14696 234 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 CYTH1Q15438 398 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 BCL7AQ4VC05 210 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 C12orf56Q8IXR9 622 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 SLC35F2Q8IXU6 374 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 ASB9Q96DX5 294 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 EDEM2Q9BV94 578 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 ACTR6Q9GZN1 396 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 RBKSQ9H477 322 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 POPDC2Q9HBU9 364 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 IL26Q9NPH9 171 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 QPCTLQ9NXS2 382 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 OR10H1Q9Y4A9 318 aa2.18□□□□□ -2.06
CCDC7-209ENST00000539197 PHF3Q92576 2039 aaKnown RBP2.18□□□□□ -2.06
CCDC7-209ENST00000539197 MROH7-TTC4A0A0A0MT08 1334 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 NSG1A0A0A6YYJ2 146 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 C12orf71A8MTZ7 269 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 PFKFB2O60825 505 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 SUPT3HO75486 399 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 TM7SF2O76062 418 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 AK1P00568 194 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 IMPDH1P20839 514 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 NT5EP21589 574 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 GYG1P46976 350 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 GRB7Q14451 532 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 KIAA0087Q14695 138 aa2.17□□□□□ -2.06
CCDC7-209ENST00000539197 TMEM183BQ1AE95 376 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms