RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 IGKV1D-16P01601 117 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 TFP02787 698 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 UCHL1P09936 223 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 UBL4AP11441 157 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 EPXP11678 715 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 HIST1H1CP16403 213 aaKnown RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 PRKCAP17252 672 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 GDI2P50395 445 aaKnown RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 PSMD4P55036 377 aaKnown RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 GNG2P59768 71 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 SIRPAP78324 504 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 KIR2DS5Q14953 304 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 CCDC58Q4VC31 144 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 TP53I3Q53FA7 332 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 HSD17B12Q53GQ0 312 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 CEP78Q5JTW2 689 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF767PQ75MW2 155 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 SLITRK4Q8IW52 837 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 OR4K13Q8NH42 304 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 HAVCR2Q8TDQ0 301 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 SMAP2Q8WU79 429 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 PATE1Q8WXA2 126 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 DNASE2BQ8WZ79 361 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 ZMYND19Q96E35 227 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 SGTBQ96EQ0 304 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 MRPL48Q96GC5 212 aaKnown RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 C7orf50Q9BRJ6 194 aaKnown RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 MED28Q9H204 178 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 CAPN10Q9HC96 672 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 CABIN1Q9Y6J0 2220 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 NCOR2Q9Y618 2525 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 TP53BP1Q12888 1972 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 TMEM131Q92545 1883 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 A0A1W2PRG6 482 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 EFCAB7A8K855 629 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 PPM1BO75688 479 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 IGHV4-34P06331 123 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 DIO1P49895 249 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 ISXQ2M1V0 245 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 BTBD16Q32M84 506 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 SLC35D3Q5M8T2 416 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 LAMTOR1Q6IAA8 161 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 DPY19L2P2Q6ZN68 376 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 Q6ZSR6 202 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 KRT74Q7RTS7 529 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 SLC35F2Q8IXU6 374 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 TOMM5Q8N4H5 51 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 OR13C5Q8NGS8 318 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 OR5H6Q8NGV6 325 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 OR14A16Q8NHC5 309 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 YIPF5Q969M3 257 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 ARSGQ96EG1 525 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 VSTM2LQ96N03 204 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 GSDMCQ9BYG8 508 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 GHITMQ9H3K2 345 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 TEKT2Q9UIF3 430 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 SPATA2Q9UM82 520 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 CAMK2AQ9UQM7 478 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 A0A1B0GVC2 190 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 BLACEA4D250 179 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 A6NIN4 97 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 CTDSPLO15194 276 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 GSTZ1O43708 216 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-207ENST00000538862 RDH16O75452 317 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 ATF1P18846 271 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 RAG2P55895 527 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 PON3Q15166 354 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 BCL2L15Q5TBC7 163 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 KIAA0895LQ68EN5 471 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 KIRREL2Q6UWL6 708 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 UNQ9370/PRO34162Q6UXP9 181 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 OOSP2Q86WS3 158 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 CADM2Q8N3J6 435 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 RFLNBQ8N5W9 214 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 LRRC17Q8N6Y2 441 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 DTX3Q8N9I9 347 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 SDR9C7Q8NEX9 313 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 OR4N2Q8NGD1 307 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 C1orf216Q8TAB5 229 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 CEP76Q8TAP6 659 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 RIT1Q92963 219 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 RBM18Q96H35 190 aaKnown RBP13.31□□□□□ -0.28
CDCA3-207ENST00000538862 G6PC3Q9BUM1 346 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 TMEM9BQ9NQ34 198 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF275Q9NSD4 429 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-207ENST00000538862 STARD5Q9NSY2 213 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 STMN3Q9NZ72 180 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 IER3IP1Q9Y5U9 82 aa13.31□□□□□ -0.28
CDCA3-207ENST00000538862 A0A087WUJ7 227 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 A0A1B0GTQ1 180 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 LRRN3E7EW58 273 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 ARPC3O15145 178 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 BCAT2O15382 392 aaPredicted RBP13.3□□□□□ -0.28
CDCA3-207ENST00000538862 GPRIN2O60269 458 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 TMEM127O75204 238 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 TCRBP04435 133 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 STOMP27105 288 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 RABIFP47224 123 aa13.3□□□□□ -0.28
CDCA3-207ENST00000538862 CSNK1EP49674 416 aaKnown RBP13.3□□□□□ -0.28
CDCA3-207ENST00000538862 HCCSP53701 268 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms