RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PCGF3Q3KNV8 242 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 TMEM215Q68D42 235 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 LINC00469Q8N7U9 141 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 OR4C16Q8NGL9 310 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 OR51A7Q8NH64 312 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 CYB5D2Q8WUJ1 264 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 CDS1Q92903 461 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 PIGMQ9H3S5 423 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 BIN3Q9NQY0 253 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 ETV7Q9Y603 341 aa17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 GOLGA4Q13439 2230 aaKnown RBP17.09■□□□□ 0.33
SFSWAP-207ENST00000538548 OR6C74A6NCV1 312 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 DISC1C4P0D8 188 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 LYPD3O95274 346 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 SOD2P04179 222 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 GP1BAP07359 652 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 ACHEP22303 614 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 AGTR1P30556 359 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 MEOX2P50222 304 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 COL9A2Q14055 689 aaPredicted RBP17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 CEBPEQ15744 281 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 KRT77Q7Z794 578 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 NUS1Q96E22 293 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 LRIG1Q96JA1 1093 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 C10orf90Q96M02 699 aa17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 TSNAXQ99598 290 aaKnown RBP17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 RSPH9Q9H1X1 276 aaPredicted RBP17.08■□□□□ 0.33
SFSWAP-207ENST00000538548 C4orf51C9J302 202 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 H7C417 338 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 RBBP9O75884 186 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 AGR2O95994 175 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 THBS1P07996 1170 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 DUSP8Q13202 625 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 ARHGAP11AQ6P4F7 1023 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 HAGHLQ6PII5 290 aaPredicted RBP17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 SLC35F2Q8IXU6 374 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 SVBPQ8N300 66 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 ASB12Q8WXK4 309 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 MTFP1Q9UDX5 166 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 MED31Q9Y3C7 131 aa17.08■□□□□ 0.32
SFSWAP-207ENST00000538548 CENPVL1A0A0U1RR11 272 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 GLSO94925 669 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 STATHP02808 62 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 SELPP16109 830 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 LTB4RQ15722 352 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 MFSD12Q6NUT3 480 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF546Q86UE3 836 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 TMEM185AQ8NFB2 350 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 MS4A6EQ96DS6 147 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 MRGPRX3Q96LB0 322 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF681Q96N22 645 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 FERD3LQ96RJ6 166 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF768Q9H5H4 540 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 CCDC86Q9H6F5 360 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 PRDM7Q9NQW5 492 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 TAS2R8Q9NYW2 309 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 CTSFQ9UBX1 484 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 ICAM5Q9UMF0 924 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF281Q9Y2X9 895 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 PCYT1BQ9Y5K3 369 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 COL4A6Q14031 1691 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 CEP290O15078 2479 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 CSF1P09603 554 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 GKN3PP0CG01 181 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 PSMB10P40306 273 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 ADH7P40394 386 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 NAA10P41227 235 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 FGL2Q14314 439 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 GGTLC2Q14390 218 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 ABHD17CQ6PCB6 329 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 PRSS16Q9NQE7 514 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 PLEKHM1Q9Y4G2 1056 aa17.07■□□□□ 0.32
SFSWAP-207ENST00000538548 TBC1D3KA0A087X1G2 549 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 TRAV14DV4A0A0A6YYC5 116 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 TBC1D3BA6NDS4 549 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 TBC1D3FA6NER0 549 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 LINC01387J3KSC0 135 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 GPR31O00270 319 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 VEGFDO43915 354 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 SYN1P17600 705 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 ZIC1Q15915 447 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 MICBQ29980 383 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 AMZ1Q400G9 498 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 TBC1D3GQ6DHY5 549 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF765Q7L2R6 523 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 AMZ2Q86W34 360 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 PUSL1Q8N0Z8 303 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 MS4A4EQ96PG1 132 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 MACROD1Q9BQ69 325 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 NCDNQ9UBB6 729 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF780BQ9Y6R6 833 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 LRRK1Q38SD2 2015 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 IGKV1-8A0A0C4DH67 115 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 PVALBP20472 110 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 ARHGAP11BQ3KRB8 267 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF528Q3MIS6 628 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 TMEM88Q6PEY1 159 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 FAM111BQ6SJ93 734 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 PHYHIPLQ96FC7 376 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms