RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 KLHL31Q9H511 634 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 MVB12BQ9H7P6 319 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 DMRT3Q9NQL9 472 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 KLHL28Q9NXS3 571 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 NKIRAS2Q9NYR9 191 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 MTFP1Q9UDX5 166 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 FBXL21Q9UKT6 434 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 TIMM13Q9Y5L4 95 aaPredicted RBP6.16□□□□□ -1.42
USP28-207ENST00000538475 SCN10AQ9Y5Y9 1956 aa6.16□□□□□ -1.42
USP28-207ENST00000538475 A0A0D9SEW6 157 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 A0A1B0GWJ7 208 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 UNC119BA6NIH7 251 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 MEIS3P2A8K0S8 358 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 EFCAB7A8K855 629 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ANHXE9PGG2 379 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 FAM227AF5H4B4 570 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 GPR31O00270 319 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 HMGN4O00479 90 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 TNFRSF10CO14798 259 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 MAGEB4O15481 346 aaPredicted RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 CTNSO60931 367 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CLN5O75503 358 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 GJB3O75712 270 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 KLHL18O94889 574 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ZNF432O94892 652 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 SPDEFO95238 335 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 SIX6O95475 246 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 IGHV2-5P01817 119 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 GLAP06280 429 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ZGLP1P0C6A0 271 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 AKAIN1P0CW23 69 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 C1GALT1C1LP0DN25 315 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 HKR1P10072 659 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ZNF35P13682 527 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 TPT1P13693 172 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 ATP1B2P14415 290 aaPredicted RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 RAB4AP20338 218 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 DPP4P27487 766 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ABCD3P28288 659 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 HOXC8P31273 242 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ATP5C1P36542 298 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 KCNJ3P48549 501 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 PTH2RP49190 550 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 P2RX1P51575 399 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CTSCP53634 463 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 H2BFSP57053 126 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 TAS2R41P59536 307 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 RAB8AP61006 207 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 RHOAP61586 193 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 RPS13P62277 151 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 RAB1AP62820 205 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 HTRA3P83110 453 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CYCSP99999 105 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 DEFA6Q01524 100 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 TWF1Q12792 350 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 MADCAM1Q13477 382 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 PIN1Q13526 163 aaPredicted RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 CBFBQ13951 182 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 HABP2Q14520 560 aaPredicted RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 PON3Q15166 354 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ALG11Q2TAA5 492 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 SLC25A35Q3KQZ1 300 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 MPPE1Q53F39 396 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ATPAF1Q5TC12 328 aaPredicted RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 OR7E24Q6IFN5 339 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 HEPHL1Q6MZM0 1159 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 FAHD2BQ6P2I3 314 aaPredicted RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 FAM199XQ6PEV8 388 aaPredicted RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 ARL9Q6T311 187 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CD300LGQ6UXG3 332 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 MBOAT2Q6ZWT7 520 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 SERINC5Q86VE9 423 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 GLB1L2Q8IW92 636 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 GTPBP8Q8N3Z3 284 aaPredicted RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 LNX2Q8N448 690 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CLDN19Q8N6F1 224 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CELF5Q8N6W0 485 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 POMGNT2Q8NAT1 580 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 SDR9C7Q8NEX9 313 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 OR6J1Q8NGC5 347 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 OR52L1Q8NGH7 329 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CD99L2Q8TCZ2 262 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 TNFAIP8L1Q8WVP5 186 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 MRPS31Q92665 395 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 DIO2Q92813 273 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 PMM1Q92871 262 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 FBXO32Q969P5 355 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 EID2BQ96D98 161 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 SMIM19Q96E16 107 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 FAHD2AQ96GK7 314 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 ZC3H10Q96K80 434 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 SLC35G5Q96KT7 338 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 FCRL4Q96PJ5 515 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 RBM14Q96PK6 669 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 DMRTA2Q96SC8 542 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 DIRC2Q96SL1 478 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 PARK7Q99497 189 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 TIMP4Q99727 224 aa6.15□□□□□ -1.42
USP28-207ENST00000538475 CMSS1Q9BQ75 279 aaKnown RBP6.15□□□□□ -1.42
USP28-207ENST00000538475 HDAC8Q9BY41 377 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms