RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SLC9A3P48764 834 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 NUP107P57740 925 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 OAFQ86UD1 273 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 TMEM99Q8N816 258 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 ATG16L2Q8NAA4 619 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 OR5J2Q8NH18 312 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 ZNF417Q8TAU3 575 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 GTPBP3Q969Y2 492 aaKnown RBP21.69■■□□□ 1.06
HMGA2-208ENST00000537429 ZHX1-C8orf76Q96EF9 292 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 ZNF587Q96SQ5 575 aaPredicted RBP21.69■■□□□ 1.06
HMGA2-208ENST00000537429 C9orf16Q9BUW7 83 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 ASPNQ9BXN1 380 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 B3GALT5Q9Y2C3 310 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 KIAA1549Q9HCM3 1950 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 ZGRF1Q86YA3 2104 aa21.69■■□□□ 1.06
HMGA2-208ENST00000537429 FAM208BQ5VWN6 2430 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 ZNF814B7Z6K7 855 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 SMAD9O15198 467 aaKnown RBP21.68■■□□□ 1.06
HMGA2-208ENST00000537429 WDR1O75083 606 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 TSPAN19P0C672 248 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 DAPP51397 102 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 P2RY4P51582 365 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 FHL1Q13642 323 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 PON3Q15166 354 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 TRIP10Q15642 601 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 CD300LDQ6UXZ3 194 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 H1FNTQ75WM6 255 aaPredicted RBP21.68■■□□□ 1.06
HMGA2-208ENST00000537429 EME1Q96AY2 570 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 UCN2Q96RP3 112 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 OSBPL10Q9BXB5 764 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 SMURF2Q9HAU4 748 aa21.68■■□□□ 1.06
HMGA2-208ENST00000537429 IGHV3-15A0A0B4J1V0 119 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 AQP7P3A6NL99 342 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 FIGNL2A6NMB9 653 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 SYNGR4O95473 234 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 HIST1H2ABP04908 130 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 PTGER4P35408 488 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 RPS4XP62701 263 aaKnown RBP21.67■■□□□ 1.06
HMGA2-208ENST00000537429 PPP2R2BQ00005 443 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 COX10Q12887 443 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 SF3B4Q15427 424 aaKnown RBP eCLIP21.67■■□□□ 1.06
HMGA2-208ENST00000537429 ACSF3Q4G176 576 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-208ENST00000537429 PLXDC2Q6UX71 529 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 HIST3H2AQ7L7L0 130 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 DOLPP1Q86YN1 238 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 ADPRHL1Q8NDY3 354 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 OR13C2Q8NGS9 318 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 FNDC9Q8TBE3 224 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 HIST1H2ACQ93077 130 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 NAA11Q9BSU3 229 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-208ENST00000537429 CHST11Q9NPF2 352 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 CLCF1Q9UBD9 225 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 MCTS1Q9ULC4 181 aaKnown RBP21.67■■□□□ 1.06
HMGA2-208ENST00000537429 SIGLEC7Q9Y286 467 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 HIF3AQ9Y2N7 669 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 ZNF175Q9Y473 711 aa21.67■■□□□ 1.06
HMGA2-208ENST00000537429 RP1L1Q8IWN7 2480 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-208ENST00000537429 PTP4A3O75365 173 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 GSTM3P21266 225 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 PMS2P3Q13401 168 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 IGFBP7Q16270 282 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 ANKDD1AQ495B1 522 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 LPCAT4Q643R3 524 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 KDM4DQ6B0I6 523 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 NANOGNBQ7Z5D8 188 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 CCDC103Q8IW40 242 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 CBR4Q8N4T8 237 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 OR51A7Q8NH64 312 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 ROBO4Q8WZ75 1007 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 TNFRSF13CQ96RJ3 184 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 TRIB1Q96RU8 372 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 ZNF556Q9HAH1 456 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 TAS2R5Q9NYW4 299 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 KIF17Q9P2E2 1029 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 SH3BGRL2Q9UJC5 107 aa21.66■■□□□ 1.06
HMGA2-208ENST00000537429 TRAV27A0A087WT01 109 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 UNC119BA6NIH7 251 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 KDM4EB2RXH2 506 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-208ENST00000537429 MS4A18H0YCH9 400 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 PLPP3O14495 311 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 SOCS2O14508 198 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 EI24O14681 340 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 RAMP1O60894 148 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 HOXD4P09016 255 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-208ENST00000537429 PEX2P28328 305 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 UQCRC1P31930 480 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 CASP6P55212 293 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 MRPL49Q13405 166 aaKnown RBP21.65■■□□□ 1.06
HMGA2-208ENST00000537429 MS4A18Q3C1V0 323 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 ZBED5Q49AG3 693 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 RTL6Q6ICC9 239 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 KLHL17Q6TDP4 642 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 ZBTB49Q6ZSB9 765 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 DNAJC9Q8WXX5 260 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 SLC29A1Q99808 456 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 RBM4BQ9BQ04 359 aaKnown RBP21.65■■□□□ 1.06
HMGA2-208ENST00000537429 RBM4Q9BWF3 364 aaKnown RBP21.65■■□□□ 1.06
HMGA2-208ENST00000537429 PRRG4Q9BZD6 226 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 UCK2Q9BZX2 261 aa21.65■■□□□ 1.06
HMGA2-208ENST00000537429 TP63Q9H3D4 680 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms