RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CXXC4Q9H2H0 198 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 LIME1Q9H400 295 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 PLEKHF2Q9H8W4 249 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 VIPAS39Q9H9C1 493 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 PLSCR4Q9NRQ2 329 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 SERINC1Q9NRX5 453 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 CCM2LQ9NUG4 571 aaPredicted RBP6.25□□□□□ -1.41
YBX3-206ENST00000536823 ARGLU1Q9NWB6 273 aaPredicted RBP6.25□□□□□ -1.41
YBX3-206ENST00000536823 KLHL28Q9NXS3 571 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 KLHL13Q9P2N7 655 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 P2RX2Q9UBL9 471 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 EDARQ9UNE0 448 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 PLEKHA6Q9Y2H5 1048 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 SPIN1Q9Y657 262 aaPredicted RBP6.25□□□□□ -1.41
YBX3-206ENST00000536823 DSCAMO60469 2012 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 DSPPQ9NZW4 1301 aa6.25□□□□□ -1.41
YBX3-206ENST00000536823 FAAHO00519 579 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 SMAD9O15198 467 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 CYTIPO60759 359 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 ANP32DO95626 131 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 RAF1P04049 648 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 BCHEP06276 602 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 DBIP07108 87 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 FESP07332 822 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 ETFAP13804 333 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 PPP3CBP16298 524 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 HOXB9P17482 250 aaPredicted RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 PSMB1P20618 241 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 ENPP1P22413 925 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 RYKP34925 604 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 APOBEC1P41238 236 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 CRATP43155 626 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 DSTNP60981 165 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 GNA13Q14344 377 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 MAPK11Q15759 364 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 LIN52Q52LA3 116 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 C6orf10Q5SRN2 563 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 MRPL2Q5T653 305 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 ABLIM2Q6H8Q1 611 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 TMPPEQ6ZT21 453 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 NUFIP2Q7Z417 695 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 GRINAQ7Z429 371 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 PEX5LQ8IYB4 626 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 ZNF440Q8IYI8 595 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 ZNF563Q8TA94 476 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 STON2Q8WXE9 905 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 GTF2H4Q92759 462 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 VPS33AQ96AX1 596 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 EBF4Q9BQW3 602 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 CCDC28BQ9BUN5 200 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 KLHL4Q9C0H6 718 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 PAIP1Q9H074 479 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 OR10A4Q9H209 315 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 RAD21L1Q9H4I0 556 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 MTHFD2LQ9H903 347 aaPredicted RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 TPT1P8Q9HAU6 139 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 BCO1Q9HAY6 547 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 FANCFQ9NPI8 374 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 CTPS2Q9NRF8 586 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 INTS9Q9NV88 658 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 THUMPD1Q9NXG2 353 aaKnown RBP6.24□□□□□ -1.41
YBX3-206ENST00000536823 ZNF226Q9NYT6 803 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 CALML5Q9NZT1 146 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 KLHL9Q9P2J3 617 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 CHRNA9Q9UGM1 479 aa6.24□□□□□ -1.41
YBX3-206ENST00000536823 ALPK2Q86TB3 2170 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 A0A096LPI6 279 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 IGHV3-15A0A0B4J1V0 119 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 CFAP73A6NFT4 308 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 SULT2B1O00204 365 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 NR5A2O00482 541 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 AP3D1O14617 1153 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 DNPH1O43598 174 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 GCM2O75603 506 aaPredicted RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 PRKD3O94806 890 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 PMS2P2O95744 297 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 YES1P07947 543 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 TFPIP10646 304 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 UQCRBP14927 111 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 IL7RP16871 459 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 KLK2P20151 261 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 FKBP2P26885 142 aaKnown RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 LOXP28300 417 aaPredicted RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 HTR3AP46098 478 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 IDH2P48735 452 aaKnown RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 CLK1P49759 484 aaKnown RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 DIO1P49895 249 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 ATP4BP51164 291 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 POLR2HP52434 150 aaKnown RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 CRISP3P54108 245 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 AQP5P55064 265 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 CSNK2A1P68400 391 aaPredicted RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 IRX1P78414 480 aaPredicted RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 RASGEF1BQ0VAM2 473 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 FAPQ12884 760 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 EPS8Q12929 822 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 FADDQ13158 208 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 SMN1Q16637 294 aaKnown RBP6.23□□□□□ -1.41
YBX3-206ENST00000536823 BEX5Q5H9J7 111 aa6.23□□□□□ -1.41
YBX3-206ENST00000536823 LRIF1Q5T3J3 769 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms