RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TMEM160Q9NX00 188 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ZNF232Q9UNY5 417 aa17.18■□□□□ 0.34
TNFRSF1B-204ENST00000536782 NBEAL1Q6ZS30 2694 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TMEM247A6NEH6 219 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 OR6C65A6NJZ3 312 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ZNF587BE7ETH6 402 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 PRG2P13727 222 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 USF1P22415 310 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 PAX7P23759 505 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 P2RY4P51582 365 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SLC18A1P54219 525 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 WDR4P57081 412 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SWI5Q1ZZU3 235 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TBRG1Q3YBR2 411 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 PRAMEF8Q5VWM4 474 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 PRAMEF7Q5VXH5 474 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CYB5R2Q6BCY4 276 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CREB3L2Q70SY1 520 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CLIP4Q8N3C7 705 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 OR1K1Q8NGR3 316 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TMEM158Q8WZ71 300 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 KCNS3Q9BQ31 491 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SPATA9Q9BWV2 254 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 THUMPD1Q9NXG2 353 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 RASD1Q9Y272 281 aa17.17■□□□□ 0.34
TNFRSF1B-204ENST00000536782 IGHV1-18A0A0C4DH31 117 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 A0A0G2JPF8 293 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TMEM120BA0PK00 339 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 HNRNPCL2B2RXH8 293 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 HNRNPCL3B7ZW38 293 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 HNRNPCL1O60812 293 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 LY6HO94772 140 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 LGI1O95970 557 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 HNRNPCL4P0DMR1 293 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SELENOPP49908 381 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 UBE2NP61088 152 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 MST1LQ2TV78 715 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 RPS26P11Q5JNZ5 115 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ATG16L1Q676U5 607 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 NIPAL3Q6P499 406 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 MSANTD1Q6ZTZ1 278 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 C3orf49Q96BT1 292 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TMEM19Q96HH6 336 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ITCHQ96J02 903 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 MAELQ96JY0 434 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ALKBH3Q96Q83 286 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SLC38A2Q96QD8 506 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 BEX2Q9BXY8 128 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TMBIM4Q9HC24 238 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ZIM2Q9NZV7 527 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 IFT52Q9Y366 437 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 FKBP7Q9Y680 259 aa17.16■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SVEP1Q4LDE5 3571 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TMEM229AB2RXF0 380 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 NPIPB7O75200 414 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 AHSA1O95433 338 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CRYAAP02489 173 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 IGHV4-31P0DP07 118 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 PDLIM4P50479 330 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SNRPD2P62316 118 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 LSM11P83369 360 aaKnown RBP eCLIP17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 LGALS3BPQ08380 585 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 GTDC1Q4AE62 458 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SLC9B1Q4ZJI4 515 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SERPINA11Q86U17 422 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 EPHX4Q8IUS5 362 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 PHC2Q8IXK0 858 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 MFSD8Q8NHS3 518 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 MGARPQ8TDB4 240 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 STK35Q8TDR2 534 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 TLCD1Q96CP7 247 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 ZNF317Q96PQ6 595 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 KATNB1Q9BVA0 655 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 SDR39U1Q9NRG7 319 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 LPAR3Q9UBY5 353 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 CHST2Q9Y4C5 530 aa17.15■□□□□ 0.34
TNFRSF1B-204ENST00000536782 NDUFS8O00217 210 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ZNF16P17020 682 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SERPINF1P36955 418 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 POLR2JP52435 117 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ZNF311Q5JNZ3 666 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 C6orf10Q5SRN2 563 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 BCL2L2Q92843 193 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 VPS33AQ96AX1 596 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SLC25A36Q96CQ1 311 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SORCS2Q96PQ0 1159 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PIMREGQ9BSJ6 248 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 LINC00470Q9BZP3 86 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 CA10Q9NS85 328 aa17.14■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ARPC4-TTLL3A0A0A6YYG9 625 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 FTCDNL1E5RQL4 147 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 UBDO15205 165 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 UPK3AO75631 287 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 PNMTP11086 282 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 GTF2E2P29084 291 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 GZMKP49863 264 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 ANKRD16Q6P6B7 361 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 LINGO2Q7L985 606 aa17.13■□□□□ 0.33
TNFRSF1B-204ENST00000536782 SLC46A3Q7Z3Q1 461 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms