RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TMEM189-UBE2V1I3L0A0 370 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 DCTN6O00399 190 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 UGDHO60701 494 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SLC19A2O60779 497 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR2A4O95047 310 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 VAMP5O95183 116 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SCGB1D2O95969 90 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 F10P00742 488 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 IGHEP01854 428 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR4A8P0C604 315 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ANXA8P13928 327 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 IFNGR1P15260 489 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ATF1P18846 271 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 C4BPBP20851 252 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 HTR2AP28223 471 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 GABRA5P31644 462 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 LHX1P48742 406 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 TNFSF10P50591 281 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 CEBPGP53567 150 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RPS14P62263 151 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 PURAQ00577 322 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 TSPAN31Q12999 210 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 C2orf27AQ580R0 203 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 FBXO47Q5MNV8 452 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 EOGTQ5NDL2 527 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ANXA8L1Q5VT79 327 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ARMC6Q6NXE6 501 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 METAP1DQ6UB28 335 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 TMED4Q7Z7H5 227 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZNF227Q86WZ6 799 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SKA3Q8IX90 412 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 GTPBP8Q8N3Z3 284 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 AMER3Q8N944 861 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 TEX19Q8NA77 164 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 BHLHE23Q8NDY6 225 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 TMIEQ8NEW7 156 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 STOML3Q8TAV4 291 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NEK7Q8TDX7 302 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR2A7Q96R45 310 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 DOHHQ9BU89 302 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 COLEC11Q9BWP8 271 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 PRDM5Q9NQX1 630 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 DUSP22Q9NRW4 184 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 GLRX2Q9NS18 164 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SEMA5BQ9P283 1151 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 MKI67P46013 3256 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 SCN5AQ14524 2016 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NUMA1Q14980 2115 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 KANTRA0A1W2PQU2 76 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR14I1A6ND48 311 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SYNDIG1LA6NDD5 238 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 A8MVJ9 347 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NPIPB9F8W1W9 429 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 H0YCG3 227 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 H3BNC9 293 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 M0QZ24 198 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SLC7A4O43246 635 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NXPH2O95156 264 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 CLDN9O95484 217 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 PDYNP01213 254 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 MRPL3P09001 348 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 PGA3P0DJD8 388 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 C1GALT1C1LP0DN25 315 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 FOLR2P14207 255 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SELPP16109 830 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RAB6AP20340 208 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ADRA1AP35348 466 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NBL1P41271 181 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 CDX1P47902 265 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 RPL29P47914 159 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 SLC6A11P48066 632 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RFX3P48380 749 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RAB5CP51148 216 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ATP1B3P54709 279 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 GAS1P54826 345 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 AP1S1P61966 158 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NHLH1Q02575 133 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 TAP2Q03519 686 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SRSF11Q05519 484 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZP2Q05996 745 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ARHGEF7Q14155 803 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 PGM5Q15124 567 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZNF239Q16600 458 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZNF674Q2M3X9 581 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 MST1LQ2TV78 715 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 LRIF1Q5T3J3 769 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 KHDRBS2Q5VWX1 349 aaKnown RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 NSUN5P2Q63ZY6 315 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZNF626Q68DY1 528 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 TSSK4Q6SA08 328 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ZNF783Q6ZMS7 281 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 CBARPQ8N350 705 aaPredicted RBP3.42□□□□□ -1.86
MCF2-210ENST00000536274 APCDD1LQ8NCL9 501 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR2AK2Q8NG84 335 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR4K1Q8NGD4 311 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 OR2A12Q8NGT7 310 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 SORCS1Q8WY21 1168 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 NTAN1Q96AB6 310 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 ECHDC3Q96DC8 303 aa3.42□□□□□ -1.86
MCF2-210ENST00000536274 RCC1LQ96I51 464 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms