RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ESPNLQ6ZVH7 1005 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 BTN2A1Q7KYR7 527 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 SLC35F3Q8IY50 421 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 OR56B4Q8NH76 319 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 ZDHHC1Q8WTX9 485 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 LIPHQ8WWY8 451 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 C8orf33Q9H7E9 229 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 C2orf42Q9NWW7 574 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 ERVK-19Q9WJR5 959 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 IFITM5A6NNB3 132 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 PIN1P1O15428 100 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 NSA2O95478 260 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 H2AFB2P0C5Z0 115 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 ANKRD34CP0C6C1 535 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 ANXA3P12429 323 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 APEHP13798 732 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 PSMB10P40306 273 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 ADH7P40394 386 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 GRK6P43250 576 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 CCR5P51681 352 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 C19orf57Q0VDD7 668 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 ERV3-1Q14264 604 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF684Q5T5D7 378 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 SLC6A19Q695T7 634 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 WBP2NLQ6ICG8 309 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 CMTM4Q8IZR5 234 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 FRMD1Q8N878 549 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF615Q8N8J6 731 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 BMPERQ8N8U9 685 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 OR6C4Q8NGE1 309 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 LGALS14Q8TCE9 139 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 RASD2Q96D21 266 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 ALG12Q9BV10 488 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 MRI1Q9BV20 369 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF222Q9UK12 451 aa14.65□□□□□ -0.06
CHMP1A-202ENST00000535997 AIPO00170 330 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ITGA10O75578 1167 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 TACSTD2P09758 323 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 THEGLP0DJG4 465 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 BLKP51451 505 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 CCR6P51684 374 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 PGDP52209 483 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 HSD17B7P56937 341 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 DLX2Q07687 328 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 C1orf61Q13536 156 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 NNATQ16517 81 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 LINC01590Q5TEZ4 76 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 PRSS45Q7RTY3 260 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ZPLD1Q8TCW7 415 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ZNF431Q8TF32 576 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 HMGB4Q8WW32 186 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 OIT3Q8WWZ8 545 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 TCTN2Q96GX1 697 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ZFP64Q9NPA5 681 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 RXFP3Q9NSD7 469 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 SLCO1C1Q9NYB5 712 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 PRODH2Q9UF12 536 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 MMP17Q9ULZ9 603 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 MOKQ9UQ07 419 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 SPTBN5Q9NRC6 3674 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 IGKV1D-42A0A075B6H8 117 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ELOA3DA6NLF2 546 aaPredicted RBP14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 IMPA2O14732 288 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ZFPL1O95159 310 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 GALNSP34059 522 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 CDKN2AP42771 156 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 SLC25A1P53007 311 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 MAT1AQ00266 395 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ELOA3BQ3SY89 546 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ZNF527Q8NB42 609 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 FAM71CQ8NEG0 241 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 ELOA3Q8NG57 546 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 OR51Q1Q8NH59 317 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 DERL3Q96Q80 235 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 SMAD5Q99717 465 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 IRF2BPLQ9H1B7 796 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 DIABLOQ9NR28 239 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 HIF3AQ9Y2N7 669 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 RNF215Q9Y6U7 377 aa14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 TDRD6O60522 2096 aaKnown RBP14.64□□□□□ -0.07
CHMP1A-202ENST00000535997 BLOC1S5-TXNDC5H3BN57 136 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 CD14P08571 375 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 MAOAP21397 527 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 GDNFP39905 211 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 BIKQ13323 160 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 GXYLT1Q4G148 440 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 RNASE12Q5GAN4 147 aaKnown RBP14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 FAM69AQ5T7M9 428 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 KIAA0895LQ68EN5 471 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 LEG1Q6P5S2 330 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 FAM199XQ6PEV8 388 aaPredicted RBP14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 LUZP2Q86TE4 346 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 EID2Q8N6I1 236 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 MOSPD2Q8NHP6 518 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 GPR137Q96N19 417 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 ORAI3Q9BRQ5 295 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 PLEKHA1Q9HB21 404 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 UBQLN4Q9NRR5 601 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 GPR27Q9NS67 375 aa14.63□□□□□ -0.07
CHMP1A-202ENST00000535997 ANKRD10Q9NXR5 420 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms