RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SDC3O75056 442 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 PBX2P40425 430 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 MAPK14Q16539 360 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 NIPAL3Q6P499 406 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 CORO6Q6QEF8 472 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 PDZD9Q8IXQ8 264 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 FAM3CQ92520 227 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 DPH1Q9BZG8 443 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 BIN3Q9NQY0 253 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 CA5BQ9Y2D0 317 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 KIR2DS5A0A0G2JLQ3 304 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 A0A0G2JNG1 304 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 SLC22A31A6NKX4 558 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 KIR2DS3K7RE56 304 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 FGF17O60258 216 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 BRINP1O60477 761 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 GALR3O60755 368 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-203ENST00000535977 ZGLP1P0C6A0 271 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 ANKRD34CP0C6C1 535 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 CALCRP30988 508 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 ACSL1P33121 698 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 KIR2DS5Q14953 304 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 AMZ1Q400G9 498 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 GPBAR1Q8TDU6 330 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 SEMA4CQ9C0C4 833 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 DNTTIP1Q9H147 329 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 S1PR5Q9H228 398 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 CMC2Q9NRP2 79 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 PIPOXQ9P0Z9 390 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 RPS6KB2Q9UBS0 482 aa16.49■□□□□ 0.23
RAB40C-203ENST00000535977 GATBO75879 557 aaKnown RBP16.48■□□□□ 0.23
RAB40C-203ENST00000535977 LYPD3O95274 346 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 RAB3BP20337 219 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 HTR2AP28223 471 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 RAG2P55895 527 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 SNRPNP63162 240 aaKnown RBP16.48■□□□□ 0.23
RAB40C-203ENST00000535977 SERTAD2Q14140 314 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 PRPF38BQ5VTL8 546 aaKnown RBP16.48■□□□□ 0.23
RAB40C-203ENST00000535977 BBS1Q8NFJ9 593 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 OR56B4Q8NH76 319 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 HOXB13Q92826 284 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-203ENST00000535977 CTHRC1Q96CG8 243 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 GSDMCQ9BYG8 508 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 TICRRQ7Z2Z1 1910 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 SOCS6O14544 535 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 DNAJB6O75190 326 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 RP2O75695 350 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 RGS9O75916 674 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-203ENST00000535977 SLC2A10O95528 541 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 SHHQ15465 462 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 SMAD2Q15796 467 aaKnown RBP16.48■□□□□ 0.23
RAB40C-203ENST00000535977 EOGTQ5NDL2 527 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 PLBD1Q6P4A8 553 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 BPIFA2Q96DR5 249 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 WDR89Q96FK6 387 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-203ENST00000535977 NKX2-4Q9H2Z4 354 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 CLDND1Q9NY35 253 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 MSRAQ9UJ68 235 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 FLVCR2Q9UPI3 526 aa16.48■□□□□ 0.23
RAB40C-203ENST00000535977 SUSD5O60279 629 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 LDB3O75112 727 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 NKX2-2O95096 273 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 SLC35E2P0CK97 266 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 MAKP20794 623 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 GABRA3P34903 492 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 RABIFP47224 123 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 MTNR1BP49286 362 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 RAB38P57729 211 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 TAS2R43P59537 309 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 TCEA2Q15560 299 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 SMARCD3Q6STE5 483 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 CA13Q8N1Q1 262 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 CSNK1A1LQ8N752 337 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 OR51G2Q8NGK0 314 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 SLC2A12Q8TD20 617 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 PRR23D1E9PI22 279 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-203ENST00000535977 RNF13O43567 381 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 PRR23D2P0DMB1 279 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-203ENST00000535977 PRG2P13727 222 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 TBXA2RP21731 343 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 RBM34P42696 430 aaKnown RBP16.47■□□□□ 0.23
RAB40C-203ENST00000535977 RGS19P49795 217 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 DGCR2P98153 550 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 MC2RQ01718 297 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 ID2Q02363 134 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 MGAT2Q10469 447 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 ZNF791Q3KP31 576 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-203ENST00000535977 B3GNTL1Q67FW5 361 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-203ENST00000535977 Q6ZSR6 202 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 RAB11FIP2Q7L804 512 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 OOSP2Q86WS3 158 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 KLBQ86Z14 1044 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 C20orf85Q9H1P6 137 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 C8orf33Q9H7E9 229 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-203ENST00000535977 TRIM36Q9NQ86 728 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 CA10Q9NS85 328 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 HRASLS2Q9NWW9 162 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 MGAT4CQ9UBM8 478 aa16.47■□□□□ 0.23
RAB40C-203ENST00000535977 MRTO4Q9UKD2 239 aaKnown RBP16.47■□□□□ 0.23
RAB40C-203ENST00000535977 XIRP2A4UGR9 3374 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms