RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 PTCHD4Q6ZW05 846 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 AHSA2Q719I0 299 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 UBQLNLQ8IYU4 475 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 PROKR2Q8NFJ6 384 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 UBASH3BQ8TF42 649 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 TCEAL3Q969E4 200 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 ST6GAL2Q96JF0 529 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 CEP19Q96LK0 163 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 KCNN2Q9H2S1 579 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 AKIRIN1Q9H9L7 192 aaPredicted RBP7.27□□□□□ -1.25
COL21A1-212ENST00000535941 MRTO4Q9UKD2 239 aaKnown RBP7.27□□□□□ -1.25
COL21A1-212ENST00000535941 NPIPB13A6NJU9 1138 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 NPIPB4C9JG80 1138 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 FTCDNL1E5RQL4 147 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 AGRPO00253 132 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 PLD2O14939 933 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 PDGFAP04085 211 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 LCKP06239 509 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 CPEP16870 476 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 SLC1A3P43003 542 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 ARL4DP49703 201 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 GPR85P60893 370 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 BDH1Q02338 343 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 EFR3AQ14156 821 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 IGF2-ASQ6U949 168 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 NAXDQ8IW45 347 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 AMER2Q8N7J2 671 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 AGBL5Q8NDL9 886 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 OR2T33Q8NG76 320 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 FANK1Q8TC84 345 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 TMEM80Q96HE8 168 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 TSSK6Q9BXA6 273 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 DCSTAMPQ9H295 470 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 MMP27Q9H306 513 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 PROK2Q9HC23 129 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 RANGRFQ9HD47 186 aaPredicted RBP7.27□□□□□ -1.25
COL21A1-212ENST00000535941 CYB5R1Q9UHQ9 305 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 A3GALT2U3KPV4 340 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 TNRC6AQ8NDV7 1962 aaKnown RBP7.27□□□□□ -1.25
COL21A1-212ENST00000535941 ZFHX4Q86UP3 3567 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 TRAV6A0A075B6T7 132 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 IRGMA1A4Y4 181 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 CLEC2LP0C7M8 214 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 LIMS3P0CW19 117 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 LIMS4P0CW20 117 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ETV1P50549 477 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ALG10BQ5I7T1 473 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 PHC2Q8IXK0 858 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 GALNT11Q8NCW6 608 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 TEX47Q8TBZ9 253 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 GRHL3Q8TE85 626 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 PTP4A1Q93096 173 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 FYTTD1Q96QD9 318 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 USB1Q9BQ65 265 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 DPH1Q9BZG8 443 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 TMEM27Q9HBJ8 222 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 PRM3Q9NNZ6 103 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 HINT3Q9NQE9 182 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ACOXLQ9NUZ1 547 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 C14orf119Q9NWQ9 140 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 GLTPQ9NZD2 209 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 MED31Q9Y3C7 131 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 CLCA3PQ9Y6N3 262 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 RAB19A4D1S5 217 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ANKUB1A6NFN9 424 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 EFCAB9A8MZ26 197 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 KHNYNO15037 678 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 RGS5O15539 181 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 SSX4O60224 188 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ZNF780AO75290 641 aaPredicted RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 CSTAP01040 98 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 FUT1P19526 365 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 GALP22466 123 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ETV5P41161 510 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 P2RX1P51575 399 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 SNRPD2P62316 118 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 POLR2GP62487 172 aaKnown RBP eCLIP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 MLLT11Q13015 90 aaPredicted RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 Q5BKY6 102 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 DND1Q8IYX4 353 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ARIH2OSQ8N7S6 290 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 TCEANCQ8N8B7 351 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 OR2Y1Q8NGV0 311 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 OR5W2Q8NH69 310 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 DEDD2Q8WXF8 326 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 SECISBP2Q96T21 854 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 SLIRPQ9GZT3 109 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 CTPS2Q9NRF8 586 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ZNF224Q9NZL3 707 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 BSNQ9UPA5 3926 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 PNMA8CA0A1B0GUJ8 204 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 RAB36O95755 333 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 IFNA16P05015 189 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 CD1AP06126 327 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 CCL4P13236 92 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 CRYBB2P43320 205 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 IDH2P48735 452 aaKnown RBP7.26□□□□□ -1.25
COL21A1-212ENST00000535941 AKR1D1P51857 326 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 FOXL2P58012 376 aa7.26□□□□□ -1.25
COL21A1-212ENST00000535941 ZNF45Q02386 682 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms